RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 TPTEP56180 551 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 GK2Q14410 553 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 KLF17Q5JT82 389 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SAMD4BQ5PRF9 694 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PRAMEF6Q5VXH4 476 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PGBD2Q6P3X8 592 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CYP2R1Q6VVX0 501 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZNF620Q6ZNG0 422 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MRPL21Q7Z2W9 205 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 NAA40Q86UY6 237 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PGAM4Q8N0Y7 254 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PARP8Q8N3A8 854 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 LNX2Q8N448 690 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CYB561A3Q8NBI2 242 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 C19orf18Q8NEA5 215 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR9Q2Q8NGE9 314 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR8B3Q8NGG8 313 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DVL3Q92997 716 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 NEIL1Q96FI4 390 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PLEKHA8Q96JA3 519 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR8B2Q96RD0 313 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TMEM246Q9BRR3 403 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MMADHCQ9H3L0 296 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 UFSP2Q9NUQ7 469 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MIOXQ9UGB7 285 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 N6AMT1Q9Y5N5 214 aa7.72□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DYSFO75923 2080 aa7.71□□□□□ -1.17
CDK5RAP3-211ENST00000578996 IGHV2-70DA0A0C4DH43 119 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TVP23AA6NH52 213 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 M0R135 149 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TNFRSF11BO00300 401 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SPRY1O43609 319 aaPredicted RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SPARCP09486 303 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 WNT2P09544 360 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 IGHV4-38-2P0DP08 117 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 CA6P23280 308 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 GGT2P36268 569 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 GSSP48637 474 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PITPNBP48739 271 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 CBX1P83916 185 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 HOXA4Q00056 320 aaPredicted RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TSPAN31Q12999 210 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ECH1Q13011 328 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TAF13Q15543 124 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 OR8G1Q15617 311 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 RSPO1Q2MKA7 263 aaPredicted RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ZNF404Q494X3 552 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 LYPD4Q6UWN0 246 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 C16orf89Q6UX73 402 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ZBTB46Q86UZ6 589 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 DEFB107AQ8IZN7 70 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 BOLLQ8N9W6 283 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 OR51L1Q8NGJ5 315 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 OR9Q1Q8NGQ5 310 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 OR11L1Q8NGX0 322 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 OR2AE1Q8NHA4 323 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SPTSSAQ969W0 71 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ZNF799Q96GE5 643 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 MAP6Q96JE9 813 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ZNF48Q96MX3 618 aaPredicted RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TECTBQ96PL2 329 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 COPS4Q9BT78 406 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ADAT1Q9BUB4 502 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TMEM165Q9HC07 324 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 IL1RAPQ9NPH3 570 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PNRC2Q9NPJ4 139 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TBC1D23Q9NUY8 699 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ARL8BQ9NVJ2 186 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 MRPL22Q9NWU5 206 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 CLN8Q9UBY8 286 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 CYB5R1Q9UHQ9 305 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TAGLN3Q9UI15 199 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 POLR3KQ9Y2Y1 108 aaPredicted RBP7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PCDHGB1Q9Y5G3 927 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 CDH10Q9Y6N8 788 aa7.71□□□□□ -1.18
CDK5RAP3-211ENST00000578996 GGT3PA6NGU5 568 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 IDH3BO43837 385 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 FAM20BO75063 409 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PRTN3P24158 256 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 CD80P33681 288 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PMELP40967 661 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 MTNR1AP48039 350 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 GYS2P54840 703 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 GNGT1P63211 74 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PAX8Q06710 450 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 FOXL1Q12952 345 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PPP1R8Q12972 351 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 MAB21L1Q13394 359 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 MPPED2Q15777 294 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ZNF181Q2M3W8 571 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SNAI3Q3KNW1 292 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 KRTAP27-1Q3LI81 207 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SFRP4Q6FHJ7 346 aaPredicted RBP7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 RPL13AP3Q6NVV1 102 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 LYPD2Q6UXB3 125 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 LRRN1Q6UXK5 716 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 COLCA1Q6ZS62 124 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SPATC1Q76KD6 591 aa7.7□□□□□ -1.18
CDK5RAP3-211ENST00000578996 DOK3Q7L591 496 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms