RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 CGGBP1Q9UFW8 167 aaPredicted RBP3.68□□□□□ -1.82
PPP4R1-209ENST00000578329 ATPIF1Q9UII2 106 aa3.68□□□□□ -1.82
PPP4R1-209ENST00000578329 NDRG4Q9ULP0 352 aaKnown RBP3.68□□□□□ -1.82
PPP4R1-209ENST00000578329 TMCC3Q9ULS5 477 aa3.68□□□□□ -1.82
PPP4R1-209ENST00000578329 AUP1Q9Y679 476 aa3.68□□□□□ -1.82
PPP4R1-209ENST00000578329 NBEAL2Q6ZNJ1 2754 aa3.68□□□□□ -1.82
PPP4R1-209ENST00000578329 COL7A1Q02388 2944 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 NOTCH3Q9UM47 2321 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TRAV40A0A0B4J280 105 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 PLSCR5A0PG75 271 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 FAM181BA6NEQ2 426 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TVP23AA6NH52 213 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 CD300LBA8K4G0 201 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ARPC2O15144 300 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 HOXA3O43365 443 aaPredicted RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TPD52L2O43399 206 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GASTP01350 101 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 IGHV4-59P01825 116 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 MELTFP08582 738 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 T-ENOLP0DO92 83 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SLC2A1P11166 492 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 HSD17B1P14061 328 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ANPEPP15144 967 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 RHCEP18577 417 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 PCMT1P22061 227 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 CA6P23280 308 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 FPR3P25089 353 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ACKR3P25106 362 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LSP1P33241 339 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 RPL4P36578 427 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 CFHR2P36980 270 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LIPAP38571 399 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 MDH1P40925 334 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 MAGEA2P43356 314 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 NUDT2P50583 147 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GYS2P54840 703 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 PROK1P58294 105 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 PCBD1P61457 104 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TEKQ02763 1124 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TRAP1Q12931 704 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TAF9Q16594 264 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GLYATL3Q5SZD4 288 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LDLRAD2Q5SZI1 272 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SLC35F1Q5T1Q4 408 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GPR139Q6DWJ6 353 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SFRP4Q6FHJ7 346 aaPredicted RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GLYATQ6IB77 296 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ASPHD2Q6ICH7 369 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SLC27A4Q6P1M0 643 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SHQ1Q6PI26 577 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 CRIP3Q6Q6R5 217 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SMARCD3Q6STE5 483 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 Q6YL49 198 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 HDDC2Q7Z4H3 204 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TMEM179BQ7Z7N9 219 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ADCK1Q86TW2 530 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 MUC20Q8N307 709 aaPredicted RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 PNKDQ8N490 385 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 BPIFB2Q8N4F0 458 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 C11orf42Q8N5U0 333 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 Q8N7P7 452 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ZNF511Q8NB15 262 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SLC37A3Q8NCC5 494 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LY6G5BQ8NDX9 201 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SDR9C7Q8NEX9 313 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 OR9Q2Q8NGE9 314 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 OR51L1Q8NGJ5 315 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SGMS2Q8NHU3 365 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 FNDC8Q8TC99 324 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TNFRSF14Q92956 283 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SPSB4Q96A44 273 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 APOBEC3DQ96AK3 386 aaPredicted RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SLCO4A1Q96BD0 722 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 TIMD4Q96H15 378 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LYZL4Q96KX0 146 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ERMAPQ96PL5 475 aaPredicted RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 DIRC2Q96SL1 478 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 CITED1Q99966 193 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 WACQ9BTA9 647 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 SSBP3Q9BWW4 388 aaPredicted RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 EGLN1Q9GZT9 426 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 HDHD2Q9H0R4 259 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LRMDAQ9H2I8 198 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 RERGLQ9H628 205 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GORASP2Q9H8Y8 452 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 MARCH7Q9H992 704 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 ELOVL3Q9HB03 270 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 RPRD1BQ9NQG5 326 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 UFSP2Q9NUQ7 469 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GID8Q9NWU2 228 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 IL20Q9NYY1 176 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 STX18Q9P2W9 335 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 EIF3KQ9UBQ5 218 aaKnown RBP3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GRHPRQ9UBQ7 328 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 GPR160Q9UJ42 338 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 RPS6KA6Q9UK32 745 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 AURKCQ9UQB9 309 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LRCH1Q9Y2L9 728 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 KLHDC2Q9Y2U9 406 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms