RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 EDF1O60869 148 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 IGHV4-38-2P0DP08 117 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 KRR1Q13601 381 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 IFI44LQ53G44 452 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 MESTQ5EB52 335 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 WDR25Q64LD2 544 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 GDPGP1Q6ZNW5 385 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 NRMQ8IXM6 262 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 OR8H2Q8N162 312 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 OR2T12Q8NG77 320 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 OR10S1Q8NGN2 331 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 NPRL2Q8WTW4 380 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 SSMEM1Q8WWF3 244 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 NRIP3Q9NQ35 241 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 ZNF879B4DU55 563 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 MRASO14807 208 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 RPL4P36578 427 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 PSMB10P40306 273 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 HLXQ14774 488 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 ZNF730Q6ZMV8 503 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 DPY19L2P2Q6ZN68 376 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 SPATC1Q76KD6 591 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 IGFN1Q86VF2 1251 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 PNLDC1Q8NA58 520 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 LRTOMTQ8WZ04 291 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 TRIM15Q9C019 465 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 C16orf95Q9H693 158 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 EMC7Q9NPA0 242 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 ERVK-18Q9QC07 812 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 HOXA3O43365 443 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 SCG5P05408 212 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 S100A6P06703 90 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 MALLQ13021 153 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 CBX3Q13185 183 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 MIDNQ504T8 468 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 ZNF620Q6ZNG0 422 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 CBLL1Q75N03 491 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 RRM2BQ7LG56 351 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 PTTG3PQ9NZH4 202 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 RPS6KA6Q9UK32 745 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 ZNF281Q9Y2X9 895 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 CAB39Q9Y376 341 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 NBEAL1Q6ZS30 2694 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 SLC22A31A6NKX4 558 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 LGALS8O00214 317 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 GMDSO60547 372 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 PTP4A3O75365 173 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 CFHR2P36980 270 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 DEFB112Q30KQ8 113 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 ZNF841Q6ZN19 808 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 BTN2A1Q7KYR7 527 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 DTX3Q8N9I9 347 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 OR51A7Q8NH64 312 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 GATAD2BQ8WXI9 593 aa9.36□□□□□ -0.91
SMARCE1-214ENST00000578112 TRAV27A0A087WT01 109 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 A0A087WUU8 490 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 GPR37O15354 613 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 MELTFP08582 738 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 CTLA4P16410 223 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 OR1E2P47887 323 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 DGCR6Q14129 220 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 RABL3Q5HYI8 236 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 C11orf88Q6PI97 169 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 METAP1DQ6UB28 335 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 OR13C2Q8NGS9 318 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 Q96M85 177 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 DPAGT1Q9H3H5 408 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 ASH2LQ9UBL3 628 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 KAAG1Q9UBP8 84 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 PFDN2Q9UHV9 154 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 TRAV38-1A0A0B4J264 116 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 MLNRO43193 412 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 IDH3BO43837 385 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 TNFRSF1BP20333 461 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 FPR3P25089 353 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 FGF12P61328 243 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 B2MP61769 119 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 KLF10Q13118 480 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 MOGAT3Q86VF5 341 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 KIR3DL3Q8N743 410 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 TPD52L3Q96J77 140 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 VIPAS39Q9H9C1 493 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 RNF7Q9UBF6 113 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 SIGLEC7Q9Y286 467 aa9.35□□□□□ -0.91
SMARCE1-214ENST00000578112 ARPC3O15145 178 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 SLC16A7O60669 478 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 GPANK1O95872 356 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 CYB5R3P00387 301 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 MMP9P14780 707 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 SNCBQ16143 134 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 OR2T2Q6IF00 324 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 BRICD5Q6PL45 260 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 HOPXQ9BPY8 73 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 PAPOLBQ9NRJ5 636 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 CD300AQ9UGN4 299 aa9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 COA3Q9Y2R0 106 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-214ENST00000578112 POLR1DQ9Y2S0 133 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms