RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 C19orf12Q9NSK7 152 aa3.52□□□□□ -1.85
NUP88-213ENST00000576862 EXD2Q9NVH0 621 aa3.52□□□□□ -1.85
NUP88-213ENST00000576862 WARS2Q9UGM6 360 aaKnown RBP3.52□□□□□ -1.85
NUP88-213ENST00000576862 IKZF2Q9UKS7 526 aa3.52□□□□□ -1.85
NUP88-213ENST00000576862 SCML1Q9UN30 329 aa3.52□□□□□ -1.85
NUP88-213ENST00000576862 AP3M1Q9Y2T2 418 aa3.52□□□□□ -1.85
NUP88-213ENST00000576862 RBBP6Q7Z6E9 1792 aaKnown RBP3.52□□□□□ -1.85
NUP88-213ENST00000576862 SCN4AP35499 1836 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 MN1Q10571 1320 aaPredicted RBP3.51□□□□□ -1.85
NUP88-213ENST00000576862 KBTBD11-OT1A0A1B0GTJ5 212 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 NPIPA7E9PJI5 369 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 PPIHO43447 177 aaKnown RBP3.51□□□□□ -1.85
NUP88-213ENST00000576862 F10P00742 488 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 FABP1P07148 127 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 NPIPA8P0DM63 369 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 CXCL8P10145 99 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 CD82P27701 267 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 MAS1LP35410 378 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 HTR5AP47898 357 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 SERPINB8P50452 374 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 UCNP55089 124 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 PLP1P60201 277 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 OSTNP61366 133 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 RPL32P62910 135 aaKnown RBP3.51□□□□□ -1.85
NUP88-213ENST00000576862 TFAMQ00059 246 aaKnown RBP3.51□□□□□ -1.85
NUP88-213ENST00000576862 RAD51Q06609 339 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 KCNJ11Q14654 390 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 SYPL1Q16563 259 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 NDUFA5Q16718 116 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 C5orf64Q2M2E5 130 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 LINC01620Q4KN68 170 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 ACTBL2Q562R1 376 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 YIF1BQ5BJH7 314 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 PIGGQ5H8A4 983 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 KHDRBS2Q5VWX1 349 aaKnown RBP3.51□□□□□ -1.85
NUP88-213ENST00000576862 SLX4IPQ5VYV7 408 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 OR2A2Q6IF42 318 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 H2AFVQ71UI9 128 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 ZNF786Q8N393 782 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 C8orf31Q8N9H6 132 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 FBXO36Q8NEA4 188 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 OR4D6Q8NGJ1 314 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 NUBPLQ8TB37 319 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 TMEM239Q8WW34 195 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 DYDC1Q8WWB3 177 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 C8orf44Q96CB5 159 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 SH3YL1Q96HL8 342 aaPredicted RBP3.51□□□□□ -1.85
NUP88-213ENST00000576862 CPB2Q96IY4 423 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 CAPZA3Q96KX2 299 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 IMMP1LQ96LU5 166 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 OPALINQ96PE5 141 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 COPS8Q99627 209 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 CXCL16Q9H2A7 254 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 OR51B6Q9H340 312 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 NXF3Q9H4D5 531 aaKnown RBP3.51□□□□□ -1.85
NUP88-213ENST00000576862 WDR54Q9H977 334 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 RAB18Q9NP72 206 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 RPS6KB2Q9UBS0 482 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 CLN8Q9UBY8 286 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 SNX12Q9UMY4 172 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 Q9Y3F1 56 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 SAR1BQ9Y6B6 198 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 PARP14Q460N5 1801 aa3.51□□□□□ -1.85
NUP88-213ENST00000576862 LCTP09848 1927 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 LRRC37A2A6NM11 1700 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 NRCAMQ92823 1304 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 KCNE1BA0A087WTH5 132 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 A0A1W2PNV4 684 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 PSIP1O75475 530 aaKnown RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 ACTL6AO96019 429 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 ETS2P15036 469 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 H2AFXP16104 143 aaPredicted RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 CBR1P16152 277 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 MAGP20916 626 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 BGNP21810 368 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 TEAD1P28347 426 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 CRABP2P29373 138 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 SLC26A3P40879 764 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 SLC1A2P43004 574 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 MRPL19P49406 292 aaKnown RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 GNG10P50151 68 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 CCR8P51685 355 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 ACLYP53396 1101 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 ATP6V0D1P61421 351 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 PITPNAQ00169 270 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 SIGLEC14Q08ET2 396 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 GRB7Q14451 532 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 PDK2Q15119 407 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 IMPG1Q17R60 797 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 TMEM52BQ4KMG9 183 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 SFT2D3Q587I9 215 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 GPR107Q5VW38 600 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 OTPQ5XKR4 325 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 OR4F3Q6IEY1 312 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 SLC8B1Q6J4K2 584 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 PRMT9Q6P2P2 845 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 KCNIP4Q6PIL6 250 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 CXCL17Q6UXB2 119 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 HSDL2Q6YN16 418 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 TMEM123Q8N131 208 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms