RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 RRP15Q9Y3B9 282 aaKnown RBP2.51□□□□□ -2.01
CDC27-219ENST00000576484 GPR179Q6PRD1 2367 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 TRAV6A0A075B6T7 132 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 IGHV1-69DA0A0B4J2H0 117 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 IGHV7-4-1A0A0J9YVY3 117 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 NDUFC2-KCTD14E9PQ53 114 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 SLC9A3R1O14745 358 aaPredicted RBP2.5□□□□□ -2.01
CDC27-219ENST00000576484 CDC40O60508 579 aaKnown RBP eCLIP2.5□□□□□ -2.01
CDC27-219ENST00000576484 IL1RNP18510 177 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 IL32P24001 234 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 MRPL19P49406 292 aaKnown RBP2.5□□□□□ -2.01
CDC27-219ENST00000576484 RPS15P62841 145 aaKnown RBP2.5□□□□□ -2.01
CDC27-219ENST00000576484 IDI1Q13907 227 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 HSDL1Q3SXM5 330 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 TTC23LQ6PF05 361 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 SCD5Q86SK9 330 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 OR9G4Q8NGQ1 327 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 N4BP2L2Q92802 583 aaPredicted RBP2.5□□□□□ -2.01
CDC27-219ENST00000576484 NRBF2Q96F24 287 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 PRRC1Q96M27 445 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 XPO6Q96QU8 1125 aaKnown RBP2.5□□□□□ -2.01
CDC27-219ENST00000576484 RSG1Q9BU20 258 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 FAM192AQ9GZU8 254 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 TMEM27Q9HBJ8 222 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 MED4Q9NPJ6 270 aa2.5□□□□□ -2.01
CDC27-219ENST00000576484 IGHV3-72A0A0B4J1Y9 119 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 CCDC169A6NNP5 214 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 PDZK1P1A8MUH7 402 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 NMT2O60551 498 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 GLSO94925 669 aaPredicted RBP2.49□□□□□ -2.01
CDC27-219ENST00000576484 IGHV3-11P01762 117 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 RGS8P57771 180 aaPredicted RBP2.49□□□□□ -2.01
CDC27-219ENST00000576484 CYP24A1Q07973 514 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 CSGALNACT2Q8N6G5 542 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 SNX31Q8N9S9 440 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 ST20-AS1Q8NBB2 130 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 OR6Q1Q8NGQ2 317 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 MYCBPQ99417 103 aaPredicted RBP2.49□□□□□ -2.01
CDC27-219ENST00000576484 CHP1Q99653 195 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 SLC7A5P2Q9GIP4 190 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 MYOZ1Q9NP98 299 aaPredicted RBP2.49□□□□□ -2.01
CDC27-219ENST00000576484 EXOSC4Q9NPD3 245 aaKnown RBP2.49□□□□□ -2.01
CDC27-219ENST00000576484 LYARQ9NX58 379 aaKnown RBP2.49□□□□□ -2.01
CDC27-219ENST00000576484 RABL2BQ9UNT1 228 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 CBY1Q9Y3M2 126 aa2.49□□□□□ -2.01
CDC27-219ENST00000576484 PCDH11XQ9BZA7 1347 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 A6NDN8 102 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 SYCE1LA8MT33 242 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 GABRPO00591 440 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 LSM8O95777 96 aaKnown RBP2.48□□□□□ -2.01
CDC27-219ENST00000576484 AGTP01019 485 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 SYKP43405 635 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 C21orf59P57076 290 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 BEX3Q00994 111 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 ART3Q13508 389 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 TMEM220Q6QAJ8 160 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 ZNF645Q8N7E2 425 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 TMEM105Q8N8V8 129 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 SPANXA2-OT1Q8N9U9 137 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 TTC29Q8NA56 475 aaPredicted RBP2.48□□□□□ -2.01
CDC27-219ENST00000576484 OR10G6Q8NH81 332 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 FAM81AQ8TBF8 368 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 C8orf44Q96CB5 159 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 UCK2Q9BZX2 261 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 SLIRPQ9GZT3 109 aaKnown RBP2.48□□□□□ -2.01
CDC27-219ENST00000576484 GEMIN7Q9H840 131 aaKnown RBP2.48□□□□□ -2.01
CDC27-219ENST00000576484 ACP6Q9NPH0 428 aa2.48□□□□□ -2.01
CDC27-219ENST00000576484 COL22A1Q8NFW1 1626 aaPredicted RBP2.48□□□□□ -2.01
CDC27-219ENST00000576484 ANKRD12Q6UB98 2062 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 CTAGE15A4D2H0 777 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 OR5H1A6NKK0 313 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 CDH16O75309 829 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 CD160O95971 181 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 HBE1P02100 147 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 RAB4AP20338 218 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 STOMP27105 288 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 UQCRFS1P47985 274 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 NDUFA8P51970 172 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 TAS2R46P59540 309 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 PPIDQ08752 370 aaKnown RBP2.47□□□□□ -2.01
CDC27-219ENST00000576484 SIGLEC14Q08ET2 396 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 SLC39A6Q13433 755 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 NCF4Q15080 339 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 TEX30Q5JUR7 227 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 SPANXN2Q5MJ10 180 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 METAP1DQ6UB28 335 aaPredicted RBP2.47□□□□□ -2.01
CDC27-219ENST00000576484 SPESP1Q6UW49 350 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 CENPQQ7L2Z9 268 aaPredicted RBP2.47□□□□□ -2.01
CDC27-219ENST00000576484 CTAGE6Q86UF2 777 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 MCUR1Q96AQ8 359 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 CDX2Q99626 313 aaPredicted RBP2.47□□□□□ -2.01
CDC27-219ENST00000576484 SLC39A1Q9NY26 324 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 C21orf62Q9NYP8 219 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 GCNT4Q9P109 453 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 SCN1AP35498 2009 aa2.47□□□□□ -2.01
CDC27-219ENST00000576484 IGHV3OR16-9A0A0B4J2B5 98 aa2.46□□□□□ -2.02
CDC27-219ENST00000576484 TRIM64CA6NLI5 447 aa2.46□□□□□ -2.02
CDC27-219ENST00000576484 DNALI1O14645 258 aaPredicted RBP2.46□□□□□ -2.02
CDC27-219ENST00000576484 PAHP00439 452 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms