RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DCAF12L2Q5VW00 463 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 LPCAT3Q6P1A2 487 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 C10orf90Q96M02 699 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 OCSTAMPQ9BR26 566 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 PAPOLGQ9BWT3 736 aaKnown RBP16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 MAGT1Q9H0U3 335 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 SPTAN1Q13813 2472 aaKnown RBP16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 IGKV1-8A0A0C4DH67 115 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 ANGPTL7O43827 346 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 DDAH2O95865 285 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 CTLA4P16410 223 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 RAG2P55895 527 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 TMEM182Q6ZP80 229 aaPredicted RBP16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 STT3BQ8TCJ2 826 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 SCPEP1Q9HB40 452 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 PIGLQ9Y2B2 252 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 LTBP4Q8N2S1 1624 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 C7orf66A4D0T2 115 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 P04436 131 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 KLF9Q13886 244 aaPredicted RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 XIRP1Q702N8 1843 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 TMEM272A0A1B0GTI8 110 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 PRSS44E7EML9 344 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 NRG2O14511 850 aaPredicted RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 ZFAND5O76080 213 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 TAGLN2P37802 199 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 EFNA3P52797 238 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 GPR85P60893 370 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 DCAF7P61962 342 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 PSG6Q00889 435 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 DEFA6Q01524 100 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 C19orf57Q0VDD7 668 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 TESK1Q15569 626 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 TOMM34Q15785 309 aaPredicted RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 NUBPLQ8TB37 319 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF681Q96N22 645 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 MRPL22Q9NWU5 206 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 OTOFQ9HC10 1997 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 ZFP92A6NM28 416 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 ARPC3O15145 178 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 BCL2L11O43521 198 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 CHRM2P08172 466 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 GALP22466 123 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 ANKRD16Q6P6B7 361 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 NPEPL1Q8NDH3 523 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 COX14Q96I36 57 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 SPIN2AQ99865 258 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 SPIN2BQ9BPZ2 258 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 PBX4Q9BYU1 374 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 METTL9Q9H1A3 318 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 LINC00862A6NCI5 91 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 QDPRP09417 244 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 RPL12P30050 165 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 SNRPEP62304 92 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 EGR3Q06889 387 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 CD226Q15762 336 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 MANEAQ5SRI9 462 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 MRPL21Q7Z2W9 205 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF100Q8IYN0 542 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 PLPP5Q8NEB5 264 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 RHOFQ9HBH0 211 aa16.12■□□□□ 0.17
ATPAF1-214ENST00000576409 MPC2O95563 127 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 BPNT1O95861 308 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 TK1P04183 234 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 SHEQ5VZ18 495 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 BRICD5Q6PL45 260 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 TRAV20A0A0B4J274 112 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 NQO2P16083 231 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 ZIC1Q15915 447 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 SLC25A30Q5SVS4 291 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 KIAA0895LQ68EN5 471 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 OR11G2Q8NGC1 345 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 OR9K2Q8NGE7 335 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 KIF26BQ2KJY2 2108 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF705FA8MVS1 300 aaPredicted RBP16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF705DP0CH99 300 aaPredicted RBP16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF705BP0CI00 300 aaPredicted RBP16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 NME1P15531 152 aaKnown RBP16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 MFGE8Q08431 387 aaPredicted RBP16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF425Q6IV72 752 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 SLC22A25Q6T423 547 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 OR6C1Q96RD1 312 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 KCNJ15Q99712 375 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 TXNIPQ9H3M7 391 aa16.11■□□□□ 0.17
ATPAF1-214ENST00000576409 MSTNO14793 375 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 MT-ATP6P00846 226 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 DAOP14920 347 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 EIF2S3P41091 472 aaKnown RBP16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 FOXL2P58012 376 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 RAB4BP61018 213 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 ELAVL1Q15717 326 aaKnown RBP16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 PCK2Q16822 640 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 RNLSQ5VYX0 342 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 SNIP1Q8TAD8 396 aaKnown RBP16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 GAS2L1Q99501 681 aaPredicted RBP16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 SLC22A11Q9NSA0 550 aa16.1■□□□□ 0.17
ATPAF1-214ENST00000576409 DTX4Q9Y2E6 619 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms