RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MBTPS2O43462 519 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 TGOLN2O43493 480 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 RAC2P15153 192 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 HBG1P69891 147 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 HBG2P69892 147 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 TESK1Q15569 626 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 TOMM34Q15785 309 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 LRRC18Q8N456 261 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 SDSLQ96GA7 329 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 ULBP2Q9BZM5 246 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 S1PR5Q9H228 398 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 FBXO34Q9NWN3 711 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 DUS4LO95620 317 aaKnown RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 GP1BAP07359 652 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 HOXD4P09016 255 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 HSD17B7P56937 341 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 CDKN3Q16667 212 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 MKXQ8IYA7 352 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR4N2Q8NGD1 307 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 RXFP4Q8TDU9 374 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 SAT2Q96F10 170 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 IL23AQ9NPF7 189 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 PCDHGA5Q9Y5G8 931 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 TIMM8BQ9Y5J9 83 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF749O43361 778 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 XRCC2O43543 280 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 F10P00742 488 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 METAP1P53582 386 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 TMEM176BQ3YBM2 270 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 SHEQ5VZ18 495 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 DOK3Q7L591 496 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 TMEM123Q8N131 208 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZSCAN4Q8NAM6 433 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF485Q8NCK3 441 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 GNPNAT1Q96EK6 184 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 SIGLEC5O15389 551 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 CA13Q8N1Q1 262 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF610Q8N9Z0 462 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 LINC01555Q8NAE3 123 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZFP62Q8NB50 900 aaPredicted RBP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 TXNIPQ9H3M7 391 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 OPA3Q9H6K4 179 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 HCFC2Q9Y5Z7 792 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 PLSCR5A0PG75 271 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 H7BYZ3 331 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 AP4M1O00189 453 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRKNO60260 465 aaPredicted RBP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 C17orf67Q0P5P2 114 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 RAB32Q13637 225 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 HNF4GQ14541 408 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 NHLRC3Q5JS37 347 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 ATPAF1Q5TC12 328 aaPredicted RBP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF660Q6AZW8 331 aaPredicted RBP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 MISPQ8IVT2 679 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 AKR7LQ8NHP1 331 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 STT3BQ8TCJ2 826 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 BTF3L4Q96K17 158 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRRX2Q99811 253 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 RAB18Q9NP72 206 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 DOCK1Q14185 1865 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 RAB27BO00194 218 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 ABCD3P28288 659 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 HNRNPKP61978 463 aaKnown RBP eCLIP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 H3F3AP84243 136 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 MRPL21Q7Z2W9 205 aaKnown RBP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 SLC38A9Q8NBW4 561 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF426Q9BUY5 554 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 CRLF2Q9HC73 371 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 TMEM100Q9NV29 134 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 SUSD2Q9UGT4 822 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 NAT2P11245 290 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 ADRA2CP18825 462 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 CDKN2AP42771 156 aaKnown RBP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRSS54Q6PEW0 395 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 UBAC2Q8NBM4 344 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 NUBPLQ8TB37 319 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 WWTR1Q9GZV5 400 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 PLEKHA3Q9HB20 300 aa11.85□□□□□ -0.51
PCDHGB3-201ENST00000576222 CLDN17P56750 224 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 YPEL5P62699 121 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF547Q8IVP9 402 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 CMBLQ96DG6 245 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 SCN4AP35499 1836 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 NKX2-2O95096 273 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 NXPH3O95157 252 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 NFYBP25208 207 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 EEF1A1P68104 462 aaKnown RBP11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRTGQ2VWP7 1150 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 AGBL4Q5VU57 503 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 ADAT1Q9BUB4 502 aaKnown RBP11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 LAT2Q9GZY6 243 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms