RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 OR4A8P0C604 315 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 CCDC159P0C7I6 412 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 DANCRP0C864 163 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 LIMS3P0CW19 117 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 LIMS4P0CW20 117 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 PIPP12273 146 aaPredicted RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 DCKP27707 260 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 DCTDP32321 178 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 TTKP33981 857 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 RGS6P49758 472 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 ETV1P50549 477 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 ZNF121P58317 390 aaPredicted RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 ST3GAL4Q11206 333 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 GALEQ14376 348 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 ADIPOQQ15848 244 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 CDONQ4KMG0 1287 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 TP53I3Q53FA7 332 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 LIPNQ5VXI9 398 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 RGS7BPQ6MZT1 257 aaPredicted RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 ZNF544Q6NX49 715 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 UNQ6126/PRO20091Q6UXV3 157 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 FAM57BQ71RH2 274 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 PRSS45Q7RTY3 260 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 LRP11Q86VZ4 500 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 FBXL14Q8N1E6 418 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 ZNF786Q8N393 782 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 STX19Q8N4C7 294 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 YIPF7Q8N8F6 280 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 ZNF540Q8NDQ6 660 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 IPCEF1Q8WWN9 437 aaPredicted RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 SGCDQ92629 289 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 PPP1R14AQ96A00 147 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 APOBEC3DQ96AK3 386 aaPredicted RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 MARS2Q96GW9 593 aaKnown RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 DOK1Q99704 481 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 ALG8Q9BVK2 526 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 JAM3Q9BX67 310 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 OR2J1Q9GZK6 312 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 NIPAL2Q9H841 368 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 INPP5EQ9NRR6 644 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 FKBP14Q9NWM8 211 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 PAK1IP1Q9NWT1 392 aaPredicted RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 ERVK13-1Q9NX77 482 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 SCN3BQ9NY72 215 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 PTTG3PQ9NZH4 202 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 CNOT2Q9NZN8 540 aaKnown RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 ZNF319Q9P2F9 582 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 CLEC2DQ9UHP7 191 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 DIMT1Q9UNQ2 313 aaKnown RBP7.36□□□□□ -1.23
NUP88-211ENST00000575976 TPRKBQ9Y3C4 175 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 CMAHPQ9Y471 501 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 LRRC42Q9Y546 428 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 APCP25054 2843 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 ANKHD1Q8IWZ3 2542 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 CADP27708 2225 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 TMEM269A0A1B0GVZ9 245 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 TMEM129A0AVI4 362 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 VSTM5A8MXK1 200 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 J3QLW9 94 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 J3QW42 95 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 TBX1O43435 398 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 SRSF10O75494 262 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 SULT1C4O75897 302 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 RPP14O95059 124 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 ATE1O95260 518 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 CLPTM1O96005 669 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 PNPP00491 289 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 CD8AP01732 235 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 CDK1P06493 297 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 SOD3P08294 240 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 ZNF19P17023 458 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 CRHBPP24387 322 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 C21orf33P30042 268 aaPredicted RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 SERPINF1P36955 418 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 MPV17P39210 176 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 PSMB10P40306 273 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 OR12D2P58182 307 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 PSMA6P60900 246 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 RPS23P62266 143 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 SLC35A2P78381 396 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 MFGE8Q08431 387 aaPredicted RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 MED21Q13503 144 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 MST1LQ2TV78 715 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 ZNF718Q3SXZ3 478 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 TMEM255AQ5JRV8 349 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 RBM48Q5RL73 367 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 GLYATL3Q5SZD4 288 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 C1orf174Q8IYL3 243 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 MUC15Q8N387 334 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 OR5L1Q8NGL2 311 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 SYNPRQ8TBG9 265 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 KLF14Q8TD94 323 aaPredicted RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 MRPL24Q96A35 216 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 RNF166Q96A37 237 aaPredicted RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 PGAM5Q96HS1 289 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 C4orf36Q96KX1 117 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 COG8Q96MW5 612 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 SIGLEC11Q96RL6 698 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 SYT3Q9BQG1 590 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 MRPL37Q9BZE1 423 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms