RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SLC13A4Q9UKG4 626 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 MAB21L2Q9Y586 359 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 TIMM10BQ9Y5J6 103 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CAPN7Q9Y6W3 813 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 PLXNB1O43157 2135 aa4.84□□□□□ -1.64
SMG6-219ENST00000575663 MEIOCA2RUB1 952 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 BBIP1A8MTZ0 92 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 J3QW42 95 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 NPFFO15130 113 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ADAM20O43506 726 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 NDUFA2O43678 99 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 FMO6PO60774 539 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 TSC22D2O75157 780 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZFPL1O95159 310 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 SLC2A10O95528 541 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 CST2P09228 141 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 COX5BP10606 129 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 KITP10721 976 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 PAICSP22234 425 aaKnown RBP4.83□□□□□ -1.64
SMG6-219ENST00000575663 GATA4P43694 442 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 HTR5AP47898 357 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZNF133P52736 654 aaPredicted RBP4.83□□□□□ -1.64
SMG6-219ENST00000575663 CD47Q08722 323 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 EGFEM1PQ0D2K5 195 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 OR1Q1Q15612 314 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZNF74Q16587 644 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ARSJQ5FYB0 599 aaPredicted RBP4.83□□□□□ -1.64
SMG6-219ENST00000575663 FAM201AQ5SY85 155 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 FAM27BQ5VT28 67 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 CORO6Q6QEF8 472 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 HACD2Q6Y1H2 254 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ASRGL1Q7L266 308 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 MEPCEQ7L2J0 689 aaKnown RBP4.83□□□□□ -1.64
SMG6-219ENST00000575663 MAVSQ7Z434 540 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 KRT73Q86Y46 540 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 CLDN22Q8N7P3 220 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 Q8NFD4 153 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 OR51G2Q8NGK0 314 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 PPP1R35Q8TAP8 253 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 Q8TCH9 128 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 SLC7A13Q8TCU3 470 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 NABP1Q96AH0 204 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 HAVCR1Q96D42 359 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 TEX37Q96LM6 180 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 PPP1R36Q96LQ0 422 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZNF582Q96NG8 517 aaPredicted RBP4.83□□□□□ -1.64
SMG6-219ENST00000575663 RAB3IPQ96QF0 476 aaPredicted RBP4.83□□□□□ -1.64
SMG6-219ENST00000575663 OR52E6Q96RD3 313 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZBTB18Q99592 522 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 CITED2Q99967 270 aaPredicted RBP4.83□□□□□ -1.64
SMG6-219ENST00000575663 EVA1AQ9H8M9 152 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 AKTIPQ9H8T0 292 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 EFCAB1Q9HAE3 211 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 SIRT7Q9NRC8 400 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 TAS2R5Q9NYW4 299 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZIM2Q9NZV7 527 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ONECUT1Q9UBC0 465 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 PFDN2Q9UHV9 154 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 ZNF229Q9UJW7 825 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 AP3M1Q9Y2T2 418 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 HYDINQ4G0P3 5121 aa4.83□□□□□ -1.64
SMG6-219ENST00000575663 TRAV38-1A0A0B4J264 116 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 IGHV3-64DA0A0J9YX35 117 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 PRORSD1PA6NEY8 169 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 C12orf71A8MTZ7 269 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 F5H5P2 479 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 BLOC1S5-TXNDC5H3BN57 136 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 LGALS8O00214 317 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 CHP2O43745 196 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 OR10H3O60404 316 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 DOK2O60496 412 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 FAM20BO75063 409 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 TRMUO75648 421 aaKnown RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 CH25HO95992 272 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 IFNW1P05000 195 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 T-ENOLP0DO92 83 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 ETS2P15036 469 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 ACADSP16219 412 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 HOXB6P17509 224 aaKnown RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 FPR3P25089 353 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 LAP3P28838 519 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 SAA4P35542 130 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 RPL4P36578 427 aaKnown RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 RGS6P49758 472 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 MVDP53602 400 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 CDH12P55289 794 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 KRTAP10-11P60412 298 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 ACSM1Q08AH1 577 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 SCRN3Q0VDG4 424 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 KLF10Q13118 480 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 CYLC2Q14093 348 aaPredicted RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 OR8B8Q15620 311 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 LY6EQ16553 131 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 LRRC75BQ2VPJ9 315 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 ANKRD39Q53RE8 183 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 CEP78Q5JTW2 689 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 MZT2BQ6NZ67 158 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 C1orf94Q6P1W5 598 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms