RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 IGHV4-39P01824 125 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 ANXA2P07355 339 aaKnown RBP10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 SBK2P0C263 348 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 KITLGP21583 273 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 MPV17P39210 176 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 OPRL1P41146 370 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 MTNR1AP48039 350 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 CX3CR1P49238 355 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 CLEC12BQ2HXU8 276 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 CLEC2AQ6UVW9 174 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 FBXW12Q6X9E4 464 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR52H1Q8NGJ2 320 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 HAVCR1Q96D42 359 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 SORCS2Q96PQ0 1159 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 DIRC2Q96SL1 478 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 OPA3Q9H6K4 179 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 ADGRL4Q9HBW9 690 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 MYEF2Q9P2K5 600 aaKnown RBP10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 PURGQ9UJV8 347 aaKnown RBP10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 IKZF2Q9UKS7 526 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 PCDHGB1Q9Y5G3 927 aa10.93□□□□□ -0.66
TRAPPC1-206ENST00000573989 C17orf100A8MU93 164 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 TBX1O43435 398 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 NDUFS7O75251 213 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ENTPD6O75354 484 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR2T7P0C7T2 308 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 NAT2P11245 290 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 TNFSF4P23510 183 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 CFL1P23528 166 aaKnown RBP10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF81P51508 661 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 RIDAP52758 137 aaKnown RBP10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 CXCR4P61073 352 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ACTC1P68032 377 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ACTA1P68133 377 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 IL5RAQ01344 420 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 EGR3Q06889 387 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 PSG7Q13046 419 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 IL18R1Q13478 541 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 MAD2L1BPQ15013 274 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF829Q3KNS6 432 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ALKBH6Q3KRA9 238 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 FAM209AQ5JX71 171 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF322Q6U7Q0 402 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 LRRN1Q6UXK5 716 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 PGAP1Q75T13 922 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 MRPL21Q7Z2W9 205 aaKnown RBP10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 TGIF2LYQ8IUE0 185 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ENTHD1Q8IYW4 607 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF679Q8IYX0 411 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR2T27Q8NH04 317 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 RHOXF1Q8NHV9 184 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 UBE2FQ969M7 185 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 MRPL48Q96GC5 212 aaKnown RBP10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 Q96MF0 132 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 RHNO1Q9BSD3 238 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 TPK1Q9H3S4 243 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 DECR2Q9NUI1 292 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 NKIRAS2Q9NYR9 191 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZDHHC8Q9ULC8 765 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 N6AMT1Q9Y5N5 214 aa10.92□□□□□ -0.66
TRAPPC1-206ENST00000573989 ACOD1A6NK06 481 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 H0YAE9 185 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 TPD52L2O43399 206 aaKnown RBP10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 DCTDP32321 178 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 PDLIM4P50479 330 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 HCCSP53701 268 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 ROM1Q03395 351 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 GK2Q14410 553 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 HLXQ14774 488 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 TIGD6Q17RP2 521 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 USP51Q70EK9 711 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 NAA40Q86UY6 237 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF540Q8NDQ6 660 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 WFDC11Q8NEX6 87 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR10H4Q8NGA5 316 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 FAM168AQ92567 244 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 RNFT2Q96EX2 444 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 PGAM5Q96HS1 289 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR8B4Q96RC9 309 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 AMELYQ99218 206 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 ADI1Q9BV57 179 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 EGLN1Q9GZT9 426 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR10A2Q9H208 303 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 POFUT1Q9H488 388 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 RGCCQ9H4X1 137 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 NKX1-2Q9UD57 310 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF391Q9UJN7 358 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 RPL36Q9Y3U8 105 aaKnown RBP10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 LRP12Q9Y561 859 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 HSPE1-MOB4S4R3N1 261 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 ITPR3Q14573 2671 aa10.91□□□□□ -0.66
TRAPPC1-206ENST00000573989 GGT3PA6NGU5 568 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 H0YJX3 145 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 NDUFS8O00217 210 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 DLGAP1O14490 977 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 KRT8P05787 483 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 SLC2A1P11166 492 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 DAOP14920 347 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 GABRB1P18505 474 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 CAPGP40121 348 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms