RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 WDR76Q9H967 626 aa12.35□□□□□ -0.43
LITAF-208ENST00000571627 CYSLTR2Q9NS75 346 aa12.35□□□□□ -0.43
LITAF-208ENST00000571627 TVP23BQ9NYZ1 205 aa12.35□□□□□ -0.43
LITAF-208ENST00000571627 CGGBP1Q9UFW8 167 aaPredicted RBP12.35□□□□□ -0.43
LITAF-208ENST00000571627 FBN1P35555 2871 aaKnown RBP12.34□□□□□ -0.43
LITAF-208ENST00000571627 SAC3D1A6NKF1 404 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 MITFO75030 526 aaPredicted RBP12.34□□□□□ -0.43
LITAF-208ENST00000571627 ADH4P08319 380 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 SPARCP09486 303 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 ACSM4P0C7M7 580 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 KITLGP21583 273 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 LIPAP38571 399 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 CDH15P55291 814 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
LITAF-208ENST00000571627 CDK5R2Q13319 367 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 HFEQ30201 348 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 KRTAP27-1Q3LI81 207 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 ZMAT1Q5H9K5 638 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 OR2T2Q6IF00 324 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 SHFQ7M4L6 423 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 CPOQ8IVL8 374 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 OR2Z1Q8NG97 314 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 CCL17Q92583 94 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 SPTSSAQ969W0 71 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
LITAF-208ENST00000571627 HAVCR1Q96D42 359 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 ELMOD3Q96FG2 381 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 INTS14Q96SY0 518 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 HCAR1Q9BXC0 346 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 BEX2Q9BXY8 128 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 SHARPINQ9H0F6 387 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 MARCH7Q9H992 704 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 LPAR2Q9HBW0 351 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 DCAF16Q9NXF7 216 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 CDC42EP3Q9UKI2 254 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 ZDHHC8Q9ULC8 765 aa12.34□□□□□ -0.43
LITAF-208ENST00000571627 ZAR1LA6NP61 321 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 FAM157AC9JC47 383 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 RAC2P15153 192 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 TPTEP56180 551 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 KLHL12Q53G59 568 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 FAM120AOSQ5T036 256 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 SLX4IPQ5VYV7 408 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 FBXW12Q6X9E4 464 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.44
LITAF-208ENST00000571627 CXXC5Q7LFL8 322 aaKnown RBP12.33□□□□□ -0.44
LITAF-208ENST00000571627 DCXRQ7Z4W1 244 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 ERI1Q8IV48 349 aaKnown RBP12.33□□□□□ -0.44
LITAF-208ENST00000571627 LINC01356Q8N9X3 169 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 CIB1Q99828 191 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 C1QTNF5Q9BXJ0 243 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 EGLN1Q9GZT9 426 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
LITAF-208ENST00000571627 TMEFF2Q9UIK5 374 aaPredicted RBP12.33□□□□□ -0.44
LITAF-208ENST00000571627 WIPI2Q9Y4P8 454 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 ORC6Q9Y5N6 252 aa12.33□□□□□ -0.44
LITAF-208ENST00000571627 COL6A5A8TX70 2615 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 CD55P08174 381 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 FAM157CP0CG43 387 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 ANOS1P23352 680 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 LMO4P61968 165 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 RPS7P62081 194 aaKnown RBP12.32□□□□□ -0.44
LITAF-208ENST00000571627 TAF13Q15543 124 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 CR1LQ2VPA4 569 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 LCN1P1Q5VSP4 162 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 C12orf73Q69YU5 71 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 COLCA1Q6ZS62 124 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 TIGD4Q8IY51 512 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 ZNF454Q8N9F8 522 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 BHLHE23Q8NDY6 225 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 OR10AD1Q8NGE0 317 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 OR6N2Q8NGY6 317 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 STMN2Q93045 179 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 SLAMF6Q96DU3 332 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 ZMYND19Q96E35 227 aaPredicted RBP12.32□□□□□ -0.44
LITAF-208ENST00000571627 C1orf159Q96HA4 380 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 DIRC2Q96SL1 478 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 GABARAPL3Q9BY60 117 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 USE1Q9NZ43 259 aa12.32□□□□□ -0.44
LITAF-208ENST00000571627 C5orf63A6NC05 138 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 ZNF878C9JN71 531 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 M0R135 149 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 LCATP04180 440 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 SLC2A5P22732 501 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 SLC15A1P46059 708 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 SLC6A9P48067 706 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 RAD23AP54725 363 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 GRB2P62993 217 aaKnown RBP12.31□□□□□ -0.44
LITAF-208ENST00000571627 GABPB1Q06547 395 aaPredicted RBP12.31□□□□□ -0.44
LITAF-208ENST00000571627 APOFQ13790 326 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 EIF2B1Q14232 305 aaKnown RBP12.31□□□□□ -0.44
LITAF-208ENST00000571627 SPATC1Q76KD6 591 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 RHOUQ7L0Q8 258 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 DPY19L4Q7Z388 723 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 PQLC1Q8N2U9 271 aa12.31□□□□□ -0.44
LITAF-208ENST00000571627 ST7LQ8TDW4 575 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms