RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 SNAI3Q3KNW1 292 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 ZNF362Q5T0B9 420 aaPredicted RBP11.56□□□□□ -0.56
RAB40B-204ENST00000571554 OR2T5Q6IEZ7 315 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 COLCA1Q6ZS62 124 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 RASSF6Q6ZTQ3 369 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 SPATC1Q76KD6 591 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 LRRC28Q86X40 367 aaPredicted RBP11.56□□□□□ -0.56
RAB40B-204ENST00000571554 SPICQ8N5J4 248 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 ZNF511Q8NB15 262 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 CCDC197Q8NCU1 140 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 C19orf18Q8NEA5 215 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 OR2T29Q8NH02 315 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 OR2AE1Q8NHA4 323 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
RAB40B-204ENST00000571554 DVL3Q92997 716 aaPredicted RBP11.56□□□□□ -0.56
RAB40B-204ENST00000571554 ZNF799Q96GE5 643 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 SLC30A2Q9BRI3 323 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 HCAR1Q9BXC0 346 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 TRIM15Q9C019 465 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 REEP1Q9H902 201 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 IL20Q9NYY1 176 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 COMMD3-BMI1R4GMX3 469 aa11.56□□□□□ -0.56
RAB40B-204ENST00000571554 CEACAM18A8MTB9 384 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 TRAPPC2LH3BP13 241 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 J3QLI3 93 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 FOXH1O75593 365 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 MDH2P40926 338 aaKnown RBP11.55□□□□□ -0.56
RAB40B-204ENST00000571554 SRP9P49458 86 aaKnown RBP11.55□□□□□ -0.56
RAB40B-204ENST00000571554 TPTEP56180 551 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 ECH1Q13011 328 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 MALLQ13021 153 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 TRIM25Q14258 630 aaKnown RBP11.55□□□□□ -0.56
RAB40B-204ENST00000571554 MICAQ29983 383 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 TMEM155Q4W5P6 130 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 FAM98BQ52LJ0 330 aaKnown RBP11.55□□□□□ -0.56
RAB40B-204ENST00000571554 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 RPL13AP3Q6NVV1 102 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 MRPL21Q7Z2W9 205 aaKnown RBP11.55□□□□□ -0.56
RAB40B-204ENST00000571554 DCXRQ7Z4W1 244 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 LNX2Q8N448 690 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 IQCF1Q8N6M8 205 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 OR6K6Q8NGW6 343 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 OR2T4Q8NH00 348 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 NANPQ8TBE9 248 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 NIPSNAP1Q9BPW8 284 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 MAGIXQ9H6Y5 334 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 MED20Q9H944 212 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 CENPMQ9NSP4 180 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 UFSP2Q9NUQ7 469 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 TMEM100Q9NV29 134 aa11.55□□□□□ -0.56
RAB40B-204ENST00000571554 FAM107AO95990 144 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 SLC2A1P11166 492 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 CALB2P22676 271 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 PMELP40967 661 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 PRKXP51817 358 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 ACTG1P63261 375 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 ZNF92Q03936 586 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 SLC27A4Q6P1M0 643 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 PGAP1Q75T13 922 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 LINC00471Q8N535 108 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 DEFB108BQ8NET1 73 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 SPRYD4Q8WW59 207 aaPredicted RBP11.54□□□□□ -0.56
RAB40B-204ENST00000571554 OTULINQ96BN8 352 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 LRGUKQ96M69 825 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 COPS4Q9BT78 406 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 RBM4Q9BWF3 364 aaKnown RBP11.54□□□□□ -0.56
RAB40B-204ENST00000571554 MUC13Q9H3R2 512 aa11.54□□□□□ -0.56
RAB40B-204ENST00000571554 IGHV3OR16-10A0A075B7F0 116 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 FAM183AA6NL82 134 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 F5H0A9 414 aaPredicted RBP11.53□□□□□ -0.56
RAB40B-204ENST00000571554 ZNF593O00488 134 aaPredicted RBP11.53□□□□□ -0.56
RAB40B-204ENST00000571554 RPS2P15880 293 aaKnown RBP11.53□□□□□ -0.56
RAB40B-204ENST00000571554 SPI1P17947 270 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 CA6P23280 308 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 GATA3P23771 443 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 FMO3P31513 532 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 ENTPD1P49961 510 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 ZNF154Q13106 437 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 SCGB2A2Q13296 93 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 MAB21L1Q13394 359 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 TAF13Q15543 124 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 MPPED2Q15777 294 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 ESCO2Q56NI9 601 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 GLYATL3Q5SZD4 288 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 ARHGAP24Q8N264 748 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 BPIFB2Q8N4F0 458 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 TEX29Q8N6K0 151 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 BOLLQ8N9W6 283 aaKnown RBP11.53□□□□□ -0.56
RAB40B-204ENST00000571554 OR2T33Q8NG76 320 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 SPTSSAQ969W0 71 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 SLAMF6Q96DU3 332 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 TMEM246Q9BRR3 403 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 DGCR6LQ9BY27 220 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 TMEM165Q9HC07 324 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 TAS2R1Q9NYW7 299 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 KCNG2Q9UJ96 466 aa11.53□□□□□ -0.56
RAB40B-204ENST00000571554 PRPF19Q9UMS4 504 aaKnown RBP11.53□□□□□ -0.56
RAB40B-204ENST00000571554 A0A0A6YYJ9 748 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms