RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CCDC71Q8IV32 467 aaPredicted RBP3.28□□□□□ -1.88
NUP88-202ENST00000570937 SLC30A8Q8IWU4 369 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 SLC43A2Q8N370 569 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 GATSQ8NAP1 163 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 SLC37A3Q8NCC5 494 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 OR9I1Q8NGQ6 314 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 OR52P1PQ8NH57 321 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 PNPT1Q8TCS8 783 aaKnown RBP3.28□□□□□ -1.88
NUP88-202ENST00000570937 GPR119Q8TDV5 335 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 SLC26A7Q8TE54 656 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 RASSF5Q8WWW0 418 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 GTF2H4Q92759 462 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 OSTF1Q92882 214 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 SLC35B4Q969S0 331 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 CPNE4Q96A23 557 aaPredicted RBP3.28□□□□□ -1.88
NUP88-202ENST00000570937 DDIT4LQ96D03 193 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 ZHX1-C8orf76Q96EF9 292 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 RNF145Q96MT1 663 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 ZNF607Q96SK3 696 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 PINK1Q9BXM7 581 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 NSRP1Q9H0G5 558 aaKnown RBP3.28□□□□□ -1.88
NUP88-202ENST00000570937 TMEM38AQ9H6F2 299 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 BCL2L10Q9HD36 194 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 FGFR1OP2Q9NVK5 253 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 GID8Q9NWU2 228 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 KLHL28Q9NXS3 571 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 KCNN3Q9UGI6 736 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 AP3M1Q9Y2T2 418 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 L3MBTL1Q9Y468 752 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 FAM215AQ9Y5M1 114 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 GMEB1Q9Y692 573 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 KCNE3Q9Y6H6 103 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 FLNCQ14315 2725 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 POLEQ07864 2286 aa3.28□□□□□ -1.88
NUP88-202ENST00000570937 NBASA2RRP1 2371 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 NPIPA5A0A0B4J1W7 369 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 A0A1W2PPR1 153 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 GMNCA6NCL1 334 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 NKX2-6A6NCS4 301 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 TUBAL3A6NHL2 446 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 SNURFLB1AK76 121 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 EEF1E1-BLOC1S5C9J1V9 151 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 NPIPA7E9PJI5 369 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 SULT2B1O00204 365 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 FAAHO00519 579 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 NDUFAB1O14561 156 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 TNFSF11O14788 317 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 EEF1E1O43324 174 aaKnown RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 ZNF208O43345 1280 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 SPRY1O43609 319 aaPredicted RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 IDH3BO43837 385 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 EIF1BO60739 113 aaKnown RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 GMNNO75496 209 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 GOSR1O95249 250 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 BCHEP06276 602 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 NPIPA8P0DM63 369 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 PNMTP11086 282 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 GPX2P18283 190 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 SFTPDP35247 375 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 IDH2P48735 452 aaKnown RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 POLR2HP52434 150 aaKnown RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 SUCLG1P53597 346 aaKnown RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 NCALDP61601 193 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 CDK6Q00534 326 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 RBBP4Q09028 425 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 MERTKQ12866 999 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 FOXF1Q12946 379 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 SELENBP1Q13228 472 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 TAB1Q15750 504 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 CD226Q15762 336 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 SYPL1Q16563 259 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 MOGAT2Q3SYC2 334 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 TMEM176BQ3YBM2 270 aaPredicted RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 FBXL19-AS1Q494R0 122 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 CBLN3Q6UW01 205 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 C5orf46Q6UWT4 87 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 FRRS1Q6ZNA5 592 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 RBPMS2Q6ZRY4 209 aaKnown RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 SSX8Q7RTT4 187 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 DHDDSQ86SQ9 333 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 FUNDC1Q8IVP5 155 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 RPRMLQ8N4K4 120 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 ANKFN1Q8N957 763 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 CNEP1R1Q8N9A8 125 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 FAM71CQ8NEG0 241 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 ATP6V1C2Q8NEY4 427 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 NUP37Q8NFH4 326 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 OR5M1Q8NGP8 315 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 OR6K3Q8NGY3 331 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 OR10D3Q8NH80 312 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 OR2V1Q8NHB1 315 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 FNDC9Q8TBE3 224 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 DNAJA4Q8WW22 397 aaPredicted RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 RNASE6Q93091 150 aaKnown RBP3.27□□□□□ -1.89
NUP88-202ENST00000570937 LRRC58Q96CX6 371 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 CMTM5Q96DZ9 223 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 C14orf79Q96F83 325 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 ANKRD27Q96NW4 1050 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 ECSITQ9BQ95 431 aa3.27□□□□□ -1.89
NUP88-202ENST00000570937 ZNF559Q9BR84 538 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms