RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 DLL4Q9NR61 685 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 GREB1LQ9C091 1923 aaPredicted RBP13.86□□□□□ -0.19
CIITA-204ENST00000570546 ANKUB1A6NFN9 424 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 TSTD3H0UI37 97 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 TAGLN2P37802 199 aaKnown RBP13.86□□□□□ -0.19
CIITA-204ENST00000570546 UBE3DQ7Z6J8 389 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 YRDCQ86U90 279 aaKnown RBP13.86□□□□□ -0.19
CIITA-204ENST00000570546 LFNGQ8NES3 379 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 XIRP1Q702N8 1843 aaKnown RBP13.86□□□□□ -0.19
CIITA-204ENST00000570546 OR2J2O76002 312 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 IGHV3-9P01782 118 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 C1QCP02747 245 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 ZGLP1P0C6A0 271 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 ZNF121P58317 390 aaPredicted RBP13.86□□□□□ -0.19
CIITA-204ENST00000570546 ZNF117Q03924 483 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 OR51F2Q8NH61 342 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 MYOTQ9UBF9 498 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 OR5V1Q9UGF6 321 aa13.86□□□□□ -0.19
CIITA-204ENST00000570546 LILRA5A6NI73 299 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 ARGFXA6NJG6 315 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 ARPC3O15145 178 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 NXPH2O95156 264 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 NTN1O95631 604 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 GABRG2P18507 467 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 TNFSF4P23510 183 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 NKX2-1P43699 371 aaPredicted RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 PTCRAQ6ISU1 281 aaPredicted RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 LHFPL2Q6ZUX7 228 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 ZFP82Q8N141 532 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 TERB2Q8NHR7 220 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 MAP6Q96JE9 813 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 TINAGL1Q9GZM7 467 aaPredicted RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 SERTAD4Q9NUC0 356 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 TIMM10BQ9Y5J6 103 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 COL11A1P12107 1806 aaPredicted RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 GSTP1P09211 210 aaKnown RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 FXNQ16595 210 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 LINC00696Q6ZRV3 163 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 OR4S1Q8NGB4 309 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 OR52H1Q8NGJ2 320 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 SLC17A5Q9NRA2 495 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 RFPL4AA6NLU0 287 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 RFPL4AL1F8VTS6 287 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 TIMM8AO60220 97 aaPredicted RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 CSRP3P50461 194 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 ZNF85Q03923 595 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 BAP18Q8IXM2 172 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 C22orf15Q8WYQ4 148 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 FBXO4Q9UKT5 387 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 FLVCR1Q9Y5Y0 555 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 MICAL3Q7RTP6 2002 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 TMEM272A0A1B0GTI8 110 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 DFFBO76075 338 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 GPANK1O95872 356 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 RPL12P30050 165 aaKnown RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 FZD2Q14332 565 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 HNF4GQ14541 408 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 CDONQ4KMG0 1287 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 SLC25A30Q5SVS4 291 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 LAIR1Q6GTX8 287 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
CIITA-204ENST00000570546 ABHD1Q96SE0 405 aa13.85□□□□□ -0.19
CIITA-204ENST00000570546 OTOL1A6NHN0 477 aaPredicted RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 H7C1Q1 480 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 SUMO3P55854 103 aaPredicted RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 FLI1Q01543 452 aaPredicted RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 PAN3Q58A45 887 aaKnown RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 TFAP2EQ6VUC0 442 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 SFTPA1Q8IWL2 248 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 MSI2Q96DH6 328 aaKnown RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 TSPAN32Q96QS1 320 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 KIR2DS1A0A191URI9 304 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 CT62P0C5K7 136 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 TCN2P20062 427 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 KIR2DS4P43632 304 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 HTRA4P83105 476 aaPredicted RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 KIR2DS1Q14954 304 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 BRICD5Q6PL45 260 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 GALNT16Q8N428 558 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 LRP5LA4QPB2 252 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 HPNP05981 417 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 BHLHE23Q8NDY6 225 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 OR1N1Q8NGS0 311 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 IGHA1P01876 353 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 GLI4P10075 376 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 BCKDHBP21953 392 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 CDKN2AP42771 156 aaKnown RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 DMKNQ6E0U4 476 aaPredicted RBP13.84□□□□□ -0.19
CIITA-204ENST00000570546 NOXO1Q8NFA2 376 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 OR10J5Q8NHC4 309 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 SFT2D1Q8WV19 159 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 C11orf40Q8WZ69 217 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 REEP6Q96HR9 211 aa13.84□□□□□ -0.19
CIITA-204ENST00000570546 BHLHE40O14503 412 aa13.83□□□□□ -0.19
CIITA-204ENST00000570546 HS3ST1O14792 307 aa13.83□□□□□ -0.19
CIITA-204ENST00000570546 GLB1P16278 677 aa13.83□□□□□ -0.19
CIITA-204ENST00000570546 CD80P33681 288 aa13.83□□□□□ -0.19
CIITA-204ENST00000570546 C11orf87Q6NUJ2 197 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms