RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PNRC2Q9NPJ4 139 aaKnown RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 BABAM2Q9NXR7 383 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 B3GNT2Q9NY97 397 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 GRIP1Q9Y3R0 1128 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 CNTRLQ7Z7A1 2325 aa5.71□□□□□ -1.49
CTDNEP1-204ENST00000570484 ATRXP46100 2492 aa5.71□□□□□ -1.49
CTDNEP1-204ENST00000570484 SPENQ96T58 3664 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 IGHV1-18A0A0C4DH31 117 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 LOC107986453A0A1B0GWG9 222 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ACOD1A6NK06 481 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMEM212A6NML5 194 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 PRR32B1ATL7 298 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 PRSS44E7EML9 344 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CCRL2O00421 344 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 MAGEB4O15481 346 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 XRCC2O43543 280 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 GPRIN2O60269 458 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ATE1O95260 518 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 SERPINA3P01011 423 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 IGLV1-44P01699 117 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CELA3BP08861 270 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 DBHP09172 617 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ACSM4P0C7M7 580 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC2A1P11166 492 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CCL2P13500 99 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF14P17017 642 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CELP19835 753 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 PCMT1P22061 227 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CFL1P23528 166 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 PTAFRP25105 342 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 PSMA1P25786 263 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 MAPK3P27361 379 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 TTKP33981 857 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 KIR2DL3P43628 341 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 RPL5P46777 297 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 TGM4P49221 684 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 NAAAQ02083 359 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC3A1Q07837 685 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 MFGE8Q08431 387 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ACSM1Q08AH1 577 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ALKBH1Q13686 389 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 TSTQ16762 297 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ODF4Q2M2E3 257 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 C3orf36Q3SXR2 165 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 BEX5Q5H9J7 111 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ARMCX4Q5H9R4 360 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 LIPKQ5VXJ0 399 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC22A25Q6T423 547 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF704Q6ZNC4 412 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 MRPL21Q7Z2W9 205 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZFP41Q8N8Y5 198 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CPEB3Q8NE35 698 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR5AK2Q8NH90 309 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC7A6Q92536 515 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 AKAP1Q92667 903 aaKnown RBP eCLIP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 THRSPQ92748 146 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 SMIM19Q96E16 107 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 POM121L2Q96KW2 1035 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 C4orf45Q96LM5 186 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 DACH2Q96NX9 599 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 RSRP1Q9BUV0 290 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 PBOV1Q9GZY1 135 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR51B6Q9H340 312 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 RGCCQ9H4X1 137 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 OPA3Q9H6K4 179 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ISYNA1Q9NPH2 558 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 FAM206AQ9NX38 181 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CRNNQ9UBG3 495 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 NUFIP1Q9UHK0 495 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF391Q9UJN7 358 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR52A1Q9UKL2 312 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 LSM2Q9Y333 95 aaKnown RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 KLF2Q9Y5W3 355 aaPredicted RBP5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 CACNA1BQ00975 2339 aa5.71□□□□□ -1.5
CTDNEP1-204ENST00000570484 MED12Q93074 2177 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 IGSF10Q6WRI0 2623 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF407Q9C0G0 2248 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 LOC100509620A0A075B734 347 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 IGHV2OR16-5A0A0B4J2B6 119 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 CCDC160A6NGH7 325 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ATP6V1G2-DDX39BF2Z307 99 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 FAM229AH3BQW9 127 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ABCD4O14678 606 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 SYT7O43581 403 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 SMPD2O60906 423 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 MTRF1O75570 445 aaKnown RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 INMTO95050 263 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 CD2P06729 351 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 CD3EP07766 207 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ADRA2AP08913 450 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OCM2P0CE71 109 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OCMP0CE72 109 aaPredicted RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF12P17014 697 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF20P17024 532 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 ACHEP22303 614 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 CD40P25942 277 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 GCH1P30793 250 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 OTX1P32242 354 aaPredicted RBP5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 RAD52P43351 418 aa5.7□□□□□ -1.5
CTDNEP1-204ENST00000570484 CCR9P51686 369 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms