RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SLCO4A1Q96BD0 722 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 HSH2DQ96JZ2 352 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 MAGEB18Q96M61 343 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 COG8Q96MW5 612 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 WDFY2Q96P53 400 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 SH3GL1Q99961 368 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 NMNAT1Q9HAN9 279 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 TCF7L1Q9HCS4 588 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 NOX4Q9NPH5 578 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 TUBG2Q9NRH3 451 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ACOXLQ9NUZ1 547 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 CMTM6Q9NX76 183 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ARMCX1Q9P291 453 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 A0A1W2PRD5 423 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 A0A1W2PRF3 423 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 A0A1W2PRM7 423 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF879B4DU55 563 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 TNFRSF13BO14836 293 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-220ENST00000569827 DIRAS1O95057 198 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 NDUFB2O95178 105 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 IGHV1-69P01742 117 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 GYPAP02724 150 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 ACSM4P0C7M7 580 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 IFNA8P32881 189 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 RPS27P42677 84 aaKnown RBP9.98□□□□□ -0.81
CAPN3-220ENST00000569827 RGS6P49758 472 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 RAD23AP54725 363 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 PROK1P58294 105 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 ARF6P62330 175 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 HIST1H3AP68431 136 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 OR8B8Q15620 311 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 TAF9Q16594 264 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 FGD3Q5JSP0 725 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 HIST2H3PS2Q5TEC6 136 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 TMPRSS11FQ6ZWK6 438 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 HIST2H3AQ71DI3 136 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 LNX2Q8N448 690 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 OR11L1Q8NGX0 322 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 OR2AE1Q8NHA4 323 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 STON2Q8WXE9 905 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 GATAD2BQ8WXI9 593 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 LZICQ8WZA0 190 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 RCN3Q96D15 328 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 RSRC1Q96IZ7 334 aaKnown RBP9.98□□□□□ -0.81
CAPN3-220ENST00000569827 COQ7Q99807 217 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 WACQ9BTA9 647 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 HCAR1Q9BXC0 346 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 HDHD2Q9H0R4 259 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 SIRPDQ9H106 197 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 SRA1Q9HD15 236 aaKnown RBP9.98□□□□□ -0.81
CAPN3-220ENST00000569827 ADA2Q9NZK5 511 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 VSX1Q9NZR4 365 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-220ENST00000569827 SIGLEC7Q9Y286 467 aa9.98□□□□□ -0.81
CAPN3-220ENST00000569827 IGLV1-36A0A0B4J1U3 117 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SLC22A31A6NKX4 558 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 P2RY10O00398 339 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 CXCR6O00574 342 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 OR10H3O60404 316 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 PTP4A3O75365 173 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SERPINA1P01009 418 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 LCATP04180 440 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 NCK1P16333 377 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 CD200P41217 278 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 GATA4P43694 442 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SEC23BQ15437 767 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 OR8G1Q15617 311 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 OCLNQ16625 522 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SNAI3Q3KNW1 292 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 ANKDD1AQ495B1 522 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 IFI44LQ53G44 452 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 METTL11BQ5VVY1 283 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 Q6ZSV7 163 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 RRM2BQ7LG56 351 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 TMEM86BQ8N661 226 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 GJC3Q8NFK1 279 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 Q8TCH9 128 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SLC7A13Q8TCU3 470 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SPRYD4Q8WW59 207 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SSMEM1Q8WWF3 244 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 FAM71F1Q96KD3 344 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-220ENST00000569827 PITX2Q99697 317 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 ADAT1Q9BUB4 502 aaKnown RBP9.97□□□□□ -0.81
CAPN3-220ENST00000569827 NRIP3Q9NQ35 241 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 SAR1AQ9NR31 198 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 ERVK-18Q9QC07 812 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 RNF7Q9UBF6 113 aa9.97□□□□□ -0.81
CAPN3-220ENST00000569827 NBEAL2Q6ZNJ1 2754 aa9.96□□□□□ -0.81
CAPN3-220ENST00000569827 TRBV4-1A0A0J9YWV2 114 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 A0A1B0GWJ7 208 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 G3V4G9 280 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 J3QW42 95 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 LGALS8O00214 317 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 GRPP07492 148 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 PSKH1P11801 424 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 OMPP47874 163 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 LIPEQ05469 1076 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms