RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SCAIQ8N9R8 606 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 ZSCAN4Q8NAM6 433 aaPredicted RBP4.65□□□□□ -1.67
CDH13-211ENST00000568770 RBM15BQ8NDT2 890 aaKnown RBP4.65□□□□□ -1.67
CDH13-211ENST00000568770 OR6X1Q8NH79 312 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 WIPF2Q8TF74 440 aaPredicted RBP4.65□□□□□ -1.67
CDH13-211ENST00000568770 SLC38A5Q8WUX1 472 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 SSMEM1Q8WWF3 244 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 RAB40AQ8WXH6 277 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 THOC1Q96FV9 657 aaKnown RBP4.65□□□□□ -1.67
CDH13-211ENST00000568770 FAM71F1Q96KD3 344 aaPredicted RBP4.65□□□□□ -1.67
CDH13-211ENST00000568770 TEX37Q96LM6 180 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 SIGLEC11Q96RL6 698 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 SLC19A3Q9BZV2 496 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 C12orf10Q9HB07 376 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 PLEKHA2Q9HB19 425 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 MRPL39Q9NYK5 338 aaKnown RBP4.65□□□□□ -1.67
CDH13-211ENST00000568770 CALML5Q9NZT1 146 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 NDUFAF4Q9P032 175 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 PPP1R3CQ9UQK1 317 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 DNAH7Q8WXX0 4024 aa4.65□□□□□ -1.67
CDH13-211ENST00000568770 LOC100509620A0A075B734 347 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 A0A0G2JPF8 293 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 KIR2DS1A0A191URI9 304 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 C5orf49A4QMS7 147 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 HNRNPCL2B2RXH8 293 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 HNRNPCL3B7ZW38 293 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 E9PBE3 544 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 TMEM178BH3BS89 294 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 TNFRSF13BO14836 293 aaPredicted RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 HNRNPCL1O60812 293 aaKnown RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 KRT75O95678 551 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SHBGP04278 402 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SFTPBP07988 381 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 PGA4P0DJD7 388 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 PGA3P0DJD8 388 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 HNRNPCL4P0DMR1 293 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SERPINB5P36952 375 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 CRATP43155 626 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 IER3P46695 156 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 MVDP53602 400 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 CLNS1AP54105 237 aaKnown RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 BPIFB3P59826 476 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 FGF12P61328 243 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 HSF2Q03933 536 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 MELKQ14680 651 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 TTMPQ5BVD1 217 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 MTX3Q5HYI7 312 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 DGAT2L7PQ6IED9 249 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SLC18B1Q6NT16 456 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 C11orf87Q6NUJ2 197 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SLC27A4Q6P1M0 643 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 ULK3Q6PHR2 472 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SLC2A7Q6PXP3 512 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 Q6ZSV7 163 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 RFPL4BQ6ZWI9 263 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SLC35D2Q76EJ3 337 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 COMTD1Q86VU5 262 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 KLBQ86Z14 1044 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 MUC20Q8N307 709 aaPredicted RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 C10orf53Q8N6V4 93 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 LSMEM1Q8N8F7 131 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 OR2Z1Q8NG97 314 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 OR6S1Q8NH40 331 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 DNAJA4Q8WW22 397 aaPredicted RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 MCHR2Q969V1 340 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SLC25A44Q96H78 314 aaPredicted RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 TMEM19Q96HH6 336 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 POM121L2Q96KW2 1035 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SAMD8Q96LT4 415 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 OR52E6Q96RD3 313 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 EPYCQ99645 322 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 NUDT16L1Q9BRJ7 211 aaKnown RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 PCGF1Q9BSM1 259 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 ABHD14AQ9BUJ0 271 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 TXLNGYQ9BZA5 131 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 C16orf95Q9H693 158 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 CACYBPQ9HB71 228 aaKnown RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 NECAP2Q9NVZ3 263 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 TAS2R5Q9NYW4 299 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 SLC17A7Q9P2U7 560 aa4.64□□□□□ -1.67
CDH13-211ENST00000568770 EIF3KQ9UBQ5 218 aaKnown RBP4.64□□□□□ -1.67
CDH13-211ENST00000568770 EPPK1P58107 5090 aaKnown RBP4.63□□□□□ -1.67
CDH13-211ENST00000568770 A0A0U1RQK1 487 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 CENPVL3A0A0U1RRI6 287 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 ZNF816-ZNF321PA0A0X1KG74 233 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 LOC100653049A0A140TA62 436 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 TMEM247A6NEH6 219 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 TIMM8AO60220 97 aaPredicted RBP4.63□□□□□ -1.67
CDH13-211ENST00000568770 KRT34O76011 436 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 OR6A2O95222 327 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 ZNF32P17041 273 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 CPT2P23786 658 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 IL12AP29459 219 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 GDI2P50395 445 aaKnown RBP4.63□□□□□ -1.67
CDH13-211ENST00000568770 DSTNP60981 165 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 UFM1P61960 85 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 PPP1CBP62140 327 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 PSG7Q13046 419 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 HIST3H3Q16695 136 aa4.63□□□□□ -1.67
CDH13-211ENST00000568770 ANXA2RQ3ZCQ2 193 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms