RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 NSD1Q96L73 2696 aaPredicted RBP11.08□□□□□ -0.64
CLK3-224ENST00000568605 ZSCAN5BA6NJL1 495 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 PHYHO14832 338 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 XRCC2O43543 280 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 SPRY3O43610 288 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 TLX2O43763 284 aaPredicted RBP11.08□□□□□ -0.64
CLK3-224ENST00000568605 BAG2O95816 211 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 HEXAP06865 529 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 ADH4P08319 380 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 PSKH1P11801 424 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 TNFRSF1AP19438 455 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 USF1P22415 310 aaPredicted RBP11.08□□□□□ -0.64
CLK3-224ENST00000568605 GIFP27352 417 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 EPHA2P29317 976 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 NR4A2P43354 598 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 MAGEB1P43366 347 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 CX3CR1P49238 355 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 CCL8P80075 99 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 LOXL1Q08397 574 aaPredicted RBP11.08□□□□□ -0.64
CLK3-224ENST00000568605 GGTLC2Q14390 218 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 TSTQ16762 297 aaKnown RBP11.08□□□□□ -0.64
CLK3-224ENST00000568605 PGAP1Q75T13 922 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 SLC16A9Q7RTY1 509 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 CBR4Q8N4T8 237 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 OR8J1Q8NGP2 316 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 RFKQ969G6 155 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 HAVCR1Q96D42 359 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 ZNF582Q96NG8 517 aaPredicted RBP11.08□□□□□ -0.64
CLK3-224ENST00000568605 MNTQ99583 582 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 YIPF3Q9GZM5 350 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 POFUT1Q9H488 388 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 NIPAL2Q9H841 368 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 NOP16Q9Y3C1 178 aaKnown RBP11.08□□□□□ -0.64
CLK3-224ENST00000568605 MALRD1Q5VYJ5 2156 aa11.08□□□□□ -0.64
CLK3-224ENST00000568605 IGHV1-69-2A0A0G2JMI3 117 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 SNTNA6NMZ2 147 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 NCR1O76036 304 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 IGHV1-46P01743 117 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 HPXP02790 462 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 ANXA2P07355 339 aaKnown RBP11.07□□□□□ -0.64
CLK3-224ENST00000568605 CFL1P23528 166 aaKnown RBP11.07□□□□□ -0.64
CLK3-224ENST00000568605 PRKXP51817 358 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 POU4F2Q12837 409 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 HLXQ14774 488 aaPredicted RBP11.07□□□□□ -0.64
CLK3-224ENST00000568605 TIGD6Q17RP2 521 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 HFEQ30201 348 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 ZBTB49Q6ZSB9 765 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 SPATC1Q76KD6 591 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 MEPCEQ7L2J0 689 aaKnown RBP11.07□□□□□ -0.64
CLK3-224ENST00000568605 KRT77Q7Z794 578 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 OR52H1Q8NGJ2 320 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 OR13G1Q8NGZ3 307 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 FAM81AQ8TBF8 368 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 THEM6Q8WUY1 208 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 IL4I1Q96RQ9 567 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 TEAD3Q99594 435 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 BPESC1Q9GZL8 116 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 MSL2Q9HCI7 577 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 C8orf4Q9NR00 106 aa11.07□□□□□ -0.64
CLK3-224ENST00000568605 MTORP42345 2549 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 CCDC182A6NF36 153 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 IQCF6A8MYZ5 107 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 VWC2LB2RUY7 222 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 CLDN25C9JDP6 229 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 M0R129 80 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 TBX1O43435 398 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 CD55P08174 381 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 MRPL3P09001 348 aaKnown RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 OPRL1P41146 370 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 GPR6P46095 362 aaPredicted RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 CHN2P52757 468 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 PSMA6P60900 246 aaKnown RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 TNFAIP6P98066 277 aaPredicted RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 SLC3A1Q07837 685 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 CDK5R2Q13319 367 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 TMED1Q13445 227 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 GK2Q14410 553 aaPredicted RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 RSPO1Q2MKA7 263 aaPredicted RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 OR2T2Q6IF00 324 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 USP51Q70EK9 711 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 OR8G5Q8NG78 346 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 OR2Z1Q8NG97 314 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 SPRYD4Q8WW59 207 aaPredicted RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 ASB17Q8WXJ9 295 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 TIMD4Q96H15 378 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 HRASLS5Q96KN8 279 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 RDH12Q96NR8 316 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 MROQ9BYG7 248 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 SLC22A4Q9H015 551 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 WARS2Q9UGM6 360 aaKnown RBP11.06□□□□□ -0.64
CLK3-224ENST00000568605 ZANQ9Y493 2812 aa11.06□□□□□ -0.64
CLK3-224ENST00000568605 HIVEP2P31629 2446 aa11.05□□□□□ -0.64
CLK3-224ENST00000568605 CRYBB2P43320 205 aa11.05□□□□□ -0.64
CLK3-224ENST00000568605 TMEM33P57088 247 aa11.05□□□□□ -0.64
CLK3-224ENST00000568605 ZNF121P58317 390 aaPredicted RBP11.05□□□□□ -0.64
CLK3-224ENST00000568605 RIN1Q13671 783 aa11.05□□□□□ -0.64
CLK3-224ENST00000568605 SNCBQ16143 134 aa11.05□□□□□ -0.64
CLK3-224ENST00000568605 SNAI3Q3KNW1 292 aa11.05□□□□□ -0.64
CLK3-224ENST00000568605 TMEM255AQ5JRV8 349 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms