RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 VN1R1Q9GZP7 353 aa8□□□□□ -1.13
HDGFL3-206ENST00000568294 SHARPINQ9H0F6 387 aa8□□□□□ -1.13
HDGFL3-206ENST00000568294 TXNIPQ9H3M7 391 aa8□□□□□ -1.13
HDGFL3-206ENST00000568294 PRMT8Q9NR22 394 aaPredicted RBP8□□□□□ -1.13
HDGFL3-206ENST00000568294 IGLV1-36A0A0B4J1U3 117 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 A8MVM7 634 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 GABRR1P24046 479 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 ZNF93P35789 620 aaPredicted RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 CASRP41180 1078 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 OR3A2P47893 321 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 POLR2HP52434 150 aaKnown RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 CLRN1P58418 232 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 SLC26A5P58743 744 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 SGCBQ16585 318 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 NAA40Q86UY6 237 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 ZNF721Q8TF20 911 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 PIGTQ969N2 578 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 C20orf24Q9BUV8 137 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 ZNF304Q9HCX3 659 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 LANCL2Q9NS86 450 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 KCNK7Q9Y2U2 307 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 R4GMQ9 66 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 A0A1B0GW55 424 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 MSGN1A6NI15 193 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 PLPP3O14495 311 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 HPP00738 406 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 FGF2P09038 288 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 UBBP0CG47 229 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 UBCP0CG48 685 aaKnown RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DUX4L2P0CJ85 424 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DUX4L3P0CJ86 424 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DUX4L4P0CJ87 422 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DUX4L5P0CJ88 424 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DUX4L6P0CJ89 424 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DUX4L7P0CJ90 424 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 RCC1P18754 421 aaPredicted RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 AMY2BP19961 511 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 CNR1P21554 472 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DRD1P21728 446 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DHPSP49366 369 aaPredicted RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 RPS27AP62979 156 aaKnown RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 UNC119Q13432 240 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 MANEAQ5SRI9 462 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 PDSS1Q5T2R2 415 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 FAM180AQ6UWF9 173 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 ETV3LQ6ZN32 361 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 TMEM17Q86X19 198 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 CATSPERDQ86XM0 798 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 C20orf196Q8IYI0 205 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 NUBPLQ8TB37 319 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DAZLQ92904 295 aaKnown RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 TOMM40LQ969M1 308 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 LRFN5Q96NI6 719 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 LAT2Q9GZY6 243 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 DUX4Q9UBX2 424 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 C9orf170A2RU37 121 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 C5orf63A6NC05 138 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 A8MXK9 166 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 C2CD4DB7Z1M9 353 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 GDF9O60383 454 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 ITGB2P05107 769 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 VSIG8P0DPA2 414 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 PVALBP20472 110 aaPredicted RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 CLDN6P56747 220 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 JMJD6Q6NYC1 403 aaPredicted RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 GAREM1Q9H706 876 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 METTL7AQ9H8H3 244 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 RNF215Q9Y6U7 377 aa7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 MUC22E2RYF6 1773 aaPredicted RBP7.99□□□□□ -1.13
HDGFL3-206ENST00000568294 RNF222A6NCQ9 220 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 WIPF3A6NGB9 483 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 CCDC85CA6NKD9 419 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 HMSDA8MTL9 139 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 ABCD4O14678 606 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 PHYHO14832 338 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 BCL2L11O43521 198 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 RAMP1O60894 148 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 GLULP15104 373 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 MGMTP16455 207 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 ASCL1P50553 236 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 FXYD4P59646 89 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 PPIAP62937 165 aaKnown RBP7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 HSF1Q00613 529 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 TGIF1Q15583 401 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 FNDC7Q5VTL7 733 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 OR6K3Q8NGY3 331 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 OR2AJ1Q8NGZ0 328 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 CMTM3Q96MX0 182 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 MRI1Q9BV20 369 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 PBOV1Q9GZY1 135 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 S1PR5Q9H228 398 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 GPR84Q9NQS5 396 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 MMP17Q9ULZ9 603 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 MRPS28Q9Y2Q9 187 aaKnown RBP7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 LSM5Q9Y4Y9 91 aaKnown RBP7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 MAP1BP46821 2468 aaKnown RBP7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 TRBV11-1A0A0K0K1C0 115 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 A0A1W2PPC4 97 aa7.98□□□□□ -1.13
HDGFL3-206ENST00000568294 FRG2CA6NGY1 282 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms