RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 DNAJC27Q9NZQ0 273 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 TLN2Q9Y4G6 2542 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 PLSCR5A0PG75 271 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 PHYHO14832 338 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 SSX4O60224 188 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 ADH4P08319 380 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 MRPL3P09001 348 aaKnown RBP17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 SBK2P0C263 348 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 ROM1Q03395 351 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 MALLQ13021 153 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 NAA40Q86UY6 237 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 ZCCHC24Q8N2G6 241 aaKnown RBP17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 GALNT4Q8N4A0 578 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 UBE2FQ969M7 185 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 SP140LQ9H930 580 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 RNPEPL1Q9HAU8 725 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 CLN6Q9NWW5 311 aa17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 PURGQ9UJV8 347 aaKnown RBP17.99■□□□□ 0.47
SHCBP1-205ENST00000566016 H2BFMP0C1H6 154 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 NAT2P11245 290 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 GABRB1P18505 474 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 PRKXP51817 358 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 CLEC2AQ6UVW9 174 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 SPATC1Q76KD6 591 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 ZNF283Q8N7M2 679 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 ZNF555Q8NEP9 628 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 CMBLQ96DG6 245 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 TMUB1Q9BVT8 246 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 TPK1Q9H3S4 243 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 OPA3Q9H6K4 179 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 PTTG3PQ9NZH4 202 aa17.98■□□□□ 0.47
SHCBP1-205ENST00000566016 SNTNA6NMZ2 147 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 TIMM8AO60220 97 aaPredicted RBP17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 CX3CR1P49238 355 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 ZNF81P51508 661 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 MRPS11P82912 194 aaKnown RBP17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 SLC34A1Q06495 639 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 GK2Q14410 553 aaPredicted RBP17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 SNAI3Q3KNW1 292 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 FAM209AQ5JX71 171 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 PRSS45Q7RTY3 260 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 SLC35F2Q8IXU6 374 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 ENTHD1Q8IYW4 607 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 ZNF525Q8N782 197 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 OR52H1Q8NGJ2 320 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 OR51G2Q8NGK0 314 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 RHOXF1Q8NHV9 184 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 DIRC2Q96SL1 478 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 APOL4Q9BPW4 351 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 VCXQ9H320 206 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 ZDHHC8Q9ULC8 765 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 TANC2Q9HCD6 1990 aa17.97■□□□□ 0.47
SHCBP1-205ENST00000566016 ZNF254O75437 659 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 LY6HO94772 140 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 SELEP16581 610 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 DCTDP32321 178 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 PSMA6P60900 246 aaKnown RBP17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 HLXQ14774 488 aaPredicted RBP17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 KRT77Q7Z794 578 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 ZNF679Q8IYX0 411 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 OR8B4Q96RC9 309 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 MROQ9BYG7 248 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 DLL4Q9NR61 685 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 NKX1-2Q9UD57 310 aaPredicted RBP17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 COPS3Q9UNS2 423 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 LRP12Q9Y561 859 aa17.96■□□□□ 0.47
SHCBP1-205ENST00000566016 CR1P17927 2039 aa17.96■□□□□ 0.46
SHCBP1-205ENST00000566016 ZSCAN5BA6NJL1 495 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 IQCF6A8MYZ5 107 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 H0YHG0 523 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 NDUFS8O00217 210 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 XRCC2O43543 280 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 ENTPD6O75354 484 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 OR2T7P0C7T2 308 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 MTNR1AP48039 350 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 HCCSP53701 268 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF121P58317 390 aaPredicted RBP17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 ALKBH6Q3KRA9 238 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 TTC23Q5W5X9 447 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 LRRN1Q6UXK5 716 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 OR2T27Q8NH04 317 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 SPSB4Q96A44 273 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 Q96MT0 163 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 CSPG4Q6UVK1 2322 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 LOC390937A0A1W2PQ73 354 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF670-ZNF695F2Z2N8 137 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 SLC2A1P11166 492 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 DAOP14920 347 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 FOSL1P15407 271 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 CXCR4P61073 352 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 EGR3Q06889 387 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF322Q6U7Q0 402 aaPredicted RBP17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 PGAP1Q75T13 922 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF786Q8N393 782 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 C10orf105Q8TEF2 133 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 FAM168AQ92567 244 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 RHNO1Q9BSD3 238 aa17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 REPIN1Q9BWE0 567 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-205ENST00000566016 A0A1B0GWJ7 208 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms