RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 MUC13Q9H3R2 512 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 CEACAM18A8MTB9 384 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 CCNB2O95067 398 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 CYB5R3P00387 301 aaPredicted RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 WNT2P09544 360 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 OTX1P32242 354 aaPredicted RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 RPS27P42677 84 aaKnown RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 MS4A2Q01362 244 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 PPP1R8Q12972 351 aaKnown RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 MUC20Q8N307 709 aaPredicted RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 LNX2Q8N448 690 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 SLC37A3Q8NCC5 494 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 OR4Q3Q8NH05 313 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 NSL1Q96IY1 281 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 CCT8L2Q96SF2 557 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 HCAR1Q9BXC0 346 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 TMEM165Q9HC07 324 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 DDX28Q9NUL7 540 aaKnown RBP13.14□□□□□ -0.31
CDH3-204ENST00000565453 TMEM100Q9NV29 134 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 INSIG2Q9Y5U4 225 aa13.14□□□□□ -0.31
CDH3-204ENST00000565453 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 M0R135 149 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 FSTL3O95633 263 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 LCATP04180 440 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 HLA-DPB1P04440 258 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 T-ENOLP0DO92 83 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 ZNF823P16415 610 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 GATA4P43694 442 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 RAD23AP54725 363 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 TPTEP56180 551 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 PAX2Q02962 417 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 ZNF154Q13106 437 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 MAB21L1Q13394 359 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 TRIM25Q14258 630 aaKnown RBP13.13□□□□□ -0.31
CDH3-204ENST00000565453 PCK2Q16822 640 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 MOGAT3Q86VF5 341 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 PROKR2Q8NFJ6 384 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 OR51L1Q8NGJ5 315 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 OR2T4Q8NH00 348 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 FAM216AQ8WUB2 273 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 POP5Q969H6 163 aaKnown RBP13.13□□□□□ -0.31
CDH3-204ENST00000565453 SLCO4A1Q96BD0 722 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 ZNF799Q96GE5 643 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 SUCNR1Q9BXA5 334 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 TSSK6Q9BXA6 273 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 DGCR6LQ9BY27 220 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
CDH3-204ENST00000565453 IGHV3-64DA0A0J9YX35 117 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 C5orf63A6NC05 138 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 HAX1O00165 279 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 ZNF205O95201 554 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 CPT2P23786 658 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 CD200P41217 278 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 MALLQ13021 153 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 CRMP1Q14194 572 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 MICAQ29983 383 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 SNAI3Q3KNW1 292 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 KLF17Q5JT82 389 aaPredicted RBP13.12□□□□□ -0.31
CDH3-204ENST00000565453 FAM201AQ5SY85 155 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 OR2T5Q6IEZ7 315 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 CELF2-AS1Q8N7Q2 184 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 ZDHHC22Q8N966 263 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 OR9Q1Q8NGQ5 310 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 OR2T29Q8NH02 315 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 Q8TCH9 128 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 DACT3Q96B18 629 aaPredicted RBP13.12□□□□□ -0.31
CDH3-204ENST00000565453 JMJD8Q96S16 334 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 TMEM246Q9BRR3 403 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 TBC1D23Q9NUY8 699 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
CDH3-204ENST00000565453 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 TRIM77I1YAP6 450 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 SOX14O95416 240 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 CALB2P22676 271 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 COMPP49747 757 aaPredicted RBP13.11□□□□□ -0.31
CDH3-204ENST00000565453 SLC25A1P53007 311 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 ZNF92Q03936 586 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 PAX8Q06710 450 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 ESCO2Q56NI9 601 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 TEX30Q5JUR7 227 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 C12orf54Q6X4T0 127 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 KLBQ86Z14 1044 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 ZNF511Q8NB15 262 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 SPTSSAQ969W0 71 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 ARMC1Q9NVT9 282 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 BAIAP2Q9UQB8 552 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 SAMHD1Q9Y3Z3 626 aaKnown RBP13.11□□□□□ -0.31
CDH3-204ENST00000565453 AUP1Q9Y679 476 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms