RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 M0R135 149 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 NOL3O60936 208 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 SRSF10O75494 262 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 PNPP00491 289 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 ANXA2P07355 339 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 DBHP09172 617 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 COX5BP10606 129 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 CRYGSP22914 178 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 KIR3DL2P43630 455 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 GDI2P50395 445 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 ASCL1P50553 236 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 RPS25P62851 125 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 FAM27E3Q08E93 113 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 GPR50Q13585 617 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 SLC25A35Q3KQZ1 300 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 WDR38Q5JTN6 314 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 BCL2L15Q5TBC7 163 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 MTFR2Q6P444 385 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 CATSPERDQ86XM0 798 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 ZNF808Q8N4W9 903 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 WDR31Q8NA23 367 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 CPEB3Q8NE35 698 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 STEAP2Q8NFT2 490 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 RPS4Y2Q8TD47 263 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 SLC7A6Q92536 515 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 S100PBPQ96BU1 408 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 ZNF799Q96GE5 643 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 PGLYRP3Q96LB9 341 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 DOK1Q99704 481 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 TMED9Q9BVK6 235 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 MOB1AQ9H8S9 216 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 FAM206AQ9NX38 181 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 B3GNT2Q9NY97 397 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 NDUFA13Q9P0J0 144 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 FRRS1LQ9P0K9 344 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 AMDHD2Q9Y303 409 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 CEPT1Q9Y6K0 416 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 PHF3Q92576 2039 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 INTS1Q8N201 2190 aaKnown RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 HRNRQ86YZ3 2850 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-205ENST00000564899 H3BSA7 217 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 PLPP2O43688 288 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 GPRIN2O60269 458 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 APOC1P02654 83 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 CD1AP06126 327 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 SLC2A1P11166 492 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 CD53P19397 219 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 GADD45AP24522 165 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 PSMA1P25786 263 aaKnown RBP9.63□□□□□ -0.87
SF3B3-205ENST00000564899 APEX1P27695 318 aaKnown RBP9.63□□□□□ -0.87
SF3B3-205ENST00000564899 GABRA5P31644 462 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 CCKARP32238 428 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 OTX1P32242 354 aaPredicted RBP9.63□□□□□ -0.87
SF3B3-205ENST00000564899 SLC6A9P48067 706 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 MMP16P51512 607 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 CCR9P51686 369 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 TPTEP56180 551 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 ZNF121P58317 390 aaPredicted RBP9.63□□□□□ -0.87
SF3B3-205ENST00000564899 TIMM50Q3ZCQ8 353 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 TIMM23BQ5SRD1 257 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 ANKRD13BQ86YJ7 626 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 PRSS35Q8N3Z0 413 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 ZNF676Q8N7Q3 588 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 IL17RDQ8NFM7 739 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 NRGNQ92686 78 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 GHSRQ92847 366 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 TMEM203Q969S6 136 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 PDCD1LG2Q9BQ51 273 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 ACTR6Q9GZN1 396 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 NAA50Q9GZZ1 169 aaKnown RBP9.63□□□□□ -0.87
SF3B3-205ENST00000564899 COMMD4Q9H0A8 199 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 RBM38Q9H0Z9 239 aaKnown RBP9.63□□□□□ -0.87
SF3B3-205ENST00000564899 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 G6PC2Q9NQR9 355 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 ENPP5Q9UJA9 477 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 OR52A1Q9UKL2 312 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 STUB1Q9UNE7 303 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 SLC22A13Q9Y226 551 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
SF3B3-205ENST00000564899 N6AMT1Q9Y5N5 214 aa9.63□□□□□ -0.87
SF3B3-205ENST00000564899 C5orf49A4QMS7 147 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 TMEM212A6NML5 194 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 OR4C45A6NMZ5 311 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 C16orf97H3BN30 126 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 AIREO43918 545 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 ZFPL1O95159 310 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 GABARAPO95166 117 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 HLA-DPB1P04440 258 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 SERPINA5P05154 406 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 ACSM4P0C7M7 580 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 CBR1P16152 277 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 NR4A1P22736 598 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 STOMP27105 288 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 APLNRP35414 380 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 UGT2B10P36537 528 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 IDH3GP51553 393 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-205ENST00000564899 TRAM1Q15629 374 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 ODF4Q2M2E3 257 aa9.62□□□□□ -0.87
SF3B3-205ENST00000564899 RSPO1Q2MKA7 263 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms