RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 COPS4Q9BT78 406 aa15.55■□□□□ 0.08
SYNGR3-204ENST00000564642 NTN4Q9HB63 628 aa15.55■□□□□ 0.08
SYNGR3-204ENST00000564642 DDX28Q9NUL7 540 aaKnown RBP15.55■□□□□ 0.08
SYNGR3-204ENST00000564642 IL19Q9UHD0 177 aa15.55■□□□□ 0.08
SYNGR3-204ENST00000564642 WIPI2Q9Y4P8 454 aa15.55■□□□□ 0.08
SYNGR3-204ENST00000564642 KIAA1324LA8MWY0 1029 aaPredicted RBP15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 IQCF6A8MYZ5 107 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 GLCEO94923 617 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 FAM157CP0CG43 387 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 PSKH1P11801 424 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 ANPEPP15144 967 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 GSTT1P30711 240 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 EIF2B1Q14232 305 aaKnown RBP15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 SPRNQ5BIV9 151 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 FAM120AOSQ5T036 256 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 LINC01590Q5TEZ4 76 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 DRAM2Q6UX65 266 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 PGAP1Q75T13 922 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 ERI1Q8IV48 349 aaKnown RBP15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 BHLHE23Q8NDY6 225 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 OR6N2Q8NGY6 317 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 ITLN1Q8WWA0 313 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 UTP4Q969X6 686 aaKnown RBP15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 INTS14Q96SY0 518 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 MDFIQ99750 246 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 PAPOLBQ9NRJ5 636 aaKnown RBP15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 TMEM100Q9NV29 134 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 AP4S1Q9Y587 144 aa15.54■□□□□ 0.08
SYNGR3-204ENST00000564642 ZNF878C9JN71 531 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 CIB2O75838 187 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 FASP25445 335 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 SLC15A1P46059 708 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 DVL1P1P54792 670 aaPredicted RBP15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 LMO4P61968 165 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 GK2Q14410 553 aaPredicted RBP15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 CR1LQ2VPA4 569 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 PLBD1Q6P4A8 553 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 SHFQ7M4L6 423 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 MRPL21Q7Z2W9 205 aaKnown RBP15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 GLCCI1Q86VQ1 547 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 RAB39BQ96DA2 213 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 OR2V2Q96R30 315 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 KCNJ15Q99712 375 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 ZNF665Q9H7R5 613 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 LPAR2Q9HBW0 351 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 TMEFF2Q9UIK5 374 aaPredicted RBP15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 PPP1R3CQ9UQK1 317 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 N6AMT1Q9Y5N5 214 aa15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 SONP18583 2426 aaKnown RBP15.53■□□□□ 0.08
SYNGR3-204ENST00000564642 ISPDA4D126 451 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 FAM157AC9JC47 383 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 G3V2T6 193 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 SRD5A1P18405 259 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 PCMT1P22061 227 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 DAPP51397 102 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 PRKXP51817 358 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 CRISP1P54107 249 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 GRB2P62993 217 aaKnown RBP15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 ATP6AP1Q15904 470 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 KLHL12Q53G59 568 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 TMEM236Q5W0B7 351 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 IL17RELQ6ZVW7 336 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 SPATC1Q76KD6 591 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 DPY19L4Q7Z388 723 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 CPOQ8IVL8 374 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 ZNF283Q8N7M2 679 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 ST7LQ8TDW4 575 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 SPRYD4Q8WW59 207 aaPredicted RBP15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 GAL3ST1Q99999 423 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 SLC30A2Q9BRI3 323 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 SLC25A19Q9HC21 320 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 TMEM106BQ9NUM4 274 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 NPTNQ9Y639 398 aa15.52■□□□□ 0.08
SYNGR3-204ENST00000564642 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.52■□□□□ 0.07
SYNGR3-204ENST00000564642 JMJD1CQ15652 2540 aa15.52■□□□□ 0.07
SYNGR3-204ENST00000564642 MSMBP08118 114 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 FCGR1AP12314 374 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 HSD11B1P28845 292 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 OTX1P32242 354 aaPredicted RBP15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 SRP9P49458 86 aaKnown RBP15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 PRSS12P56730 875 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 SNAI3Q3KNW1 292 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 FAHD1Q6P587 224 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 OR10AD1Q8NGE0 317 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 OR51F2Q8NH61 342 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 ZMYND19Q96E35 227 aaPredicted RBP15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 ABHD6Q9BV23 337 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 TOR3AQ9H497 397 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 MARCH7Q9H992 704 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 TVP23BQ9NYZ1 205 aa15.51■□□□□ 0.07
SYNGR3-204ENST00000564642 NBEAL1Q6ZS30 2694 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 H0YL77 283 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 PRODHO43272 600 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 SBK2P0C263 348 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 RAD23AP54725 363 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 RPS7P62081 194 aaKnown RBP15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 ESRRGP62508 458 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 SNAPC1Q16533 368 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 SLC35D3Q5M8T2 416 aa15.5■□□□□ 0.07
SYNGR3-204ENST00000564642 CCDC121Q6ZUS5 278 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms