RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 RPS23P62266 143 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SRSF5Q13243 272 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 EIF2B1Q14232 305 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 PRAMEF8Q5VWM4 474 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 PRAMEF7Q5VXH5 474 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 RPL7L1Q6DKI1 246 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 AWAT2Q6E213 333 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 EIF5AL1Q6IS14 154 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF529Q6P280 563 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 GKN2Q86XP6 184 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF610Q8N9Z0 462 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SEMA6DQ8NFY4 1073 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC25A43Q8WUT9 341 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNRF4Q8WWF5 429 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF775Q96BV0 537 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ARSGQ96EG1 525 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 PARP11Q9NR21 331 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 DNAJB11Q9UBS4 358 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 TMED7Q9Y3B3 224 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SEC16AO15027 2179 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 CD81P60033 236 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 SSBP1Q04837 148 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 PPA1Q15181 289 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 ELOCQ15369 112 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 DEFB110Q30KQ9 67 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 MESTQ5EB52 335 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF627Q7L945 461 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 FAM219AQ8IW50 185 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 OR2A5Q96R48 311 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 ZMAT3Q9HA38 289 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 FBRSQ9HAH7 460 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 UBQLN4Q9NRR5 601 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 CALML5Q9NZT1 146 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 MMP17Q9ULZ9 603 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 ICAM5Q9UMF0 924 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HDGFL3Q9Y3E1 203 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 MMACHCQ9Y4U1 282 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 CABIN1Q9Y6J0 2220 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 A0A1B0GVT2 93 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 LDB3O75112 727 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 APBB3O95704 486 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 AK1P00568 194 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 AKR1C4P17516 323 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 AKT2P31751 481 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 MAS1LP35410 378 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 SULT1A2P50226 295 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 TRA2BP62995 288 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 RUNX2Q13950 521 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 EBPQ15125 230 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 FCRL6Q6DN72 434 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 FIGLAQ6QHK4 219 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 TDHQ8IZJ6 230 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 NUP43Q8NFH3 380 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 OR10AD1Q8NGE0 317 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 OR6K6Q8NGW6 343 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 TNFRSF13CQ96RJ3 184 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 FAM86C1Q9NVL1 165 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 HRASLS2Q9NWW9 162 aa12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 VSX1Q9NZR4 365 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-203ENST00000562609 PRR32B1ATL7 298 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 EIF1AYO14602 144 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 SOX15O60248 233 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 EIF1AXP47813 144 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF136P52737 540 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 C2orf76Q3KRA6 126 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 CARFQ8N187 725 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 SLC16A11Q8NCK7 471 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 OR4S1Q8NGB4 309 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 OR5AK2Q8NH90 309 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 RAB24Q969Q5 203 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 MVB12AQ96EY5 273 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 GALNT14Q96FL9 552 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 OR5AC2Q9NZP5 309 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 FLVCR1Q9Y5Y0 555 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF780BQ9Y6R6 833 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ADAM10O14672 748 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 CDC40O60508 579 aaKnown RBP eCLIP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 TSPAN15O95858 294 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 IL2RAP01589 272 aa12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-203ENST00000562609 MPZP25189 248 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms