RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 HCAR1Q9BXC0 346 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR52D1Q9H346 318 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 KRCC1Q9NPI7 259 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PNRC2Q9NPJ4 139 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 DCAF13Q9NV06 445 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 POM121CA8CG34 1229 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 F5H5K5 113 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 NDUFAB1O14561 156 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 HOXA3O43365 443 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CCDC22O60826 627 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 HIST1H1CP16403 213 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 RAD23AP54725 363 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PSME3P61289 254 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 RFX4Q33E94 735 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CLEC12AQ5QGZ9 265 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PRAMEF6Q5VXH4 476 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 GLYATQ6IB77 296 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 DCDC5Q6ZRR9 648 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ZBTB46Q86UZ6 589 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR10S1Q8NGN2 331 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 Q8TCH9 128 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ATF6BQ99941 703 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FN3KQ9H479 309 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 RPRD1BQ9NQG5 326 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CLN8Q9UBY8 286 aa13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 SAMD4AQ9UPU9 718 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 VWFP04275 2813 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 C22orf46C9J442 243 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ARPC3O15145 178 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FAM20BO75063 409 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 SEMG1P04279 462 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ANOS1P23352 680 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OMGP23515 440 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 GGT2P36268 569 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PSMB10P40306 273 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CD200P41217 278 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FGF12P61328 243 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 TRAP1Q12931 704 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 MPPED2Q15777 294 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 DEFB112Q30KQ8 113 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 WDR25Q64LD2 544 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 C16orf87Q6PH81 154 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 TREML4Q6UXN2 200 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CELF2-AS1Q8N7Q2 184 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR4K13Q8NH42 304 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 SLCO4A1Q96BD0 722 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 TMIGD2Q96BF3 282 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PITX2Q99697 317 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PRDM13Q9H4Q3 707 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ZNF446Q9NWS9 450 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CYB5R1Q9UHQ9 305 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 V9GYQ6 96 aa13.9□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR6C68A6NDL8 312 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 PHYHO14832 338 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 RENP00797 406 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 LCATP04180 440 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 IRF2P14316 349 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SLC6A6P31641 620 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 ECH1Q13011 328 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 KRT72Q14CN4 511 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 PGAP1Q75T13 922 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SPATC1Q76KD6 591 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 RNF148Q8N7C7 305 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SDR9C7Q8NEX9 313 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 ERGIC1Q969X5 290 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 MAP6Q96JE9 813 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 IFT27Q9BW83 186 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SLITRK2Q9H156 845 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 UFSP2Q9NUQ7 469 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 MRPL22Q9NWU5 206 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 CTSZQ9UBR2 303 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SRRM5B3KS81 715 aa13.88□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 GADD45GO95257 159 aa13.88□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 MALLQ13021 153 aa13.88□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 RUSC1-AS1Q66K80 236 aa13.88□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 OR11L1Q8NGX0 322 aa13.88□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 OR2AJ1Q8NGZ0 328 aa13.88□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 C5orf63A6NC05 138 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 FAM181BA6NEQ2 426 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 ENSAO43768 121 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 HLA-DQA2P01906 255 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SFTPBP07988 381 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 PSKH1P11801 424 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 CA6P23280 308 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 RPS27P42677 84 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SPIBQ01892 262 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SNAI3Q3KNW1 292 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SLC36A3Q495N2 470 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 MRPL21Q7Z2W9 205 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 SPRYD4Q8WW59 207 aaPredicted RBP13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 PYURFQ96I23 114 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 PCGF1Q9BSM1 259 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 ADAT1Q9BUB4 502 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 MYLK2Q9H1R3 596 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 GORASP2Q9H8Y8 452 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 TNFRSF19Q9NS68 423 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 ADA2Q9NZK5 511 aa13.87□□□□□ -0.19
VPS9D1-AS1-201ENST00000562298 MMP24Q9Y5R2 645 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms