RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 IQCF1Q8N6M8 205 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 OR13G1Q8NGZ3 307 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 TMEM186Q96B77 213 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 ZNF582Q96NG8 517 aaPredicted RBP17.45■□□□□ 0.38
TPM1-232ENST00000561425 SIGLEC11Q96RL6 698 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 TMEM106BQ9NUM4 274 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 M0R135 149 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 IGHV2-70P01814 119 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 ANPEPP15144 967 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 SELEP16581 610 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 SRD5A1P18405 259 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 ANOS1P23352 680 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 GINS1Q14691 196 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 SHQ1Q6PI26 577 aaKnown RBP17.44■□□□□ 0.38
TPM1-232ENST00000561425 DRAM2Q6UX65 266 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 RHOUQ7L0Q8 258 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 ITLN1Q8WWA0 313 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 SPTSSAQ969W0 71 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 DUS3LQ96G46 650 aaKnown RBP17.44■□□□□ 0.38
TPM1-232ENST00000561425 ZNF799Q96GE5 643 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 DCAF16Q9NXF7 216 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 NPTNQ9Y639 398 aa17.44■□□□□ 0.38
TPM1-232ENST00000561425 H3BN98 237 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 SURF4O15260 269 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 MLNRO43193 412 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 E2F6O75461 281 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 GLCEO94923 617 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 LCATP04180 440 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 HNF1AP20823 631 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 PCMT1P22061 227 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 C1orf146Q5VVC0 180 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 IL17RELQ6ZVW7 336 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 GLCCI1Q86VQ1 547 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 OR5AS1Q8N127 324 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 OR51F2Q8NH61 342 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 RAB39BQ96DA2 213 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 SLAMF6Q96DU3 332 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 OR2V2Q96R30 315 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 KCNJ15Q99712 375 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 REPIN1Q9BWE0 567 aaKnown RBP17.43■□□□□ 0.38
TPM1-232ENST00000561425 GCM1Q9NP62 436 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 G6PC2Q9NQR9 355 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 HIF1ANQ9NWT6 349 aa17.43■□□□□ 0.38
TPM1-232ENST00000561425 FBN1P35555 2871 aaKnown RBP17.42■□□□□ 0.38
TPM1-232ENST00000561425 TRAV20A0A0B4J274 112 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 FAM183AA6NL82 134 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 HMGN1P05114 100 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 SPARCP09486 303 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 SNAI3Q3KNW1 292 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 FAHD1Q6P587 224 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 LRRC28Q86X40 367 aaPredicted RBP17.42■□□□□ 0.38
TPM1-232ENST00000561425 TIGD4Q8IY51 512 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 DNAJC9Q8WXX5 260 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 MED20Q9H944 212 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 ZNF556Q9HAH1 456 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 SLC25A19Q9HC21 320 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 TMEM100Q9NV29 134 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 TANC2Q9HCD6 1990 aa17.42■□□□□ 0.38
TPM1-232ENST00000561425 C5orf63A6NC05 138 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 H0YL77 283 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 IFNL4K9M1U5 179 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 PLPP2O43688 288 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 FSTL3O95633 263 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 GSTT1P30711 240 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 MALLQ13021 153 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 HNRNPA0Q13151 305 aaKnown RBP17.41■□□□□ 0.38
TPM1-232ENST00000561425 ZNF181Q2M3W8 571 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 TMEM155Q4W5P6 130 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 PEG10Q86TG7 708 aaKnown RBP17.41■□□□□ 0.38
TPM1-232ENST00000561425 PARP8Q8N3A8 854 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 ATG16L2Q8NAA4 619 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 OR6K6Q8NGW6 343 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 MEGF10Q96KG7 1140 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 PPP1R3CQ9UQK1 317 aa17.41■□□□□ 0.38
TPM1-232ENST00000561425 ZNF878C9JN71 531 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 TMEM178BH3BS89 294 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 TIPRLO75663 272 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 POU1F1P28069 291 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 GATA4P43694 442 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 DAPP51397 102 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 ZNF92Q03936 586 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 PGAP1Q75T13 922 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 CXXC5Q7LFL8 322 aaKnown RBP17.4■□□□□ 0.38
TPM1-232ENST00000561425 PRSS45Q7RTY3 260 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 DPY19L4Q7Z388 723 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 CELF2-AS1Q8N7Q2 184 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 RNF133Q8WVZ7 376 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 SPSB4Q96A44 273 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 INTS14Q96SY0 518 aa17.4■□□□□ 0.38
TPM1-232ENST00000561425 ANKRD65E5RJM6 399 aa17.39■□□□□ 0.37
TPM1-232ENST00000561425 PTBP3O95758 552 aaKnown RBP17.39■□□□□ 0.37
TPM1-232ENST00000561425 PAICSP22234 425 aaKnown RBP17.39■□□□□ 0.37
TPM1-232ENST00000561425 SLC2A5P22732 501 aa17.39■□□□□ 0.37
TPM1-232ENST00000561425 RBMXP38159 391 aaKnown RBP17.39■□□□□ 0.37
TPM1-232ENST00000561425 SRP9P49458 86 aaKnown RBP17.39■□□□□ 0.37
TPM1-232ENST00000561425 MMP16P51512 607 aa17.39■□□□□ 0.37
TPM1-232ENST00000561425 GRB2P62993 217 aaKnown RBP17.39■□□□□ 0.37
TPM1-232ENST00000561425 MAB21L1Q13394 359 aa17.39■□□□□ 0.37
TPM1-232ENST00000561425 PLBD1Q6P4A8 553 aa17.39■□□□□ 0.37
TPM1-232ENST00000561425 SHFQ7M4L6 423 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms