RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 GGTLC2Q14390 218 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 OR8G1Q15617 311 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 HFEQ30201 348 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 HIST2H3PS2Q5TEC6 136 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 LINC01590Q5TEZ4 76 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 ZNF691Q5VV52 312 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 LRRN1Q6UXK5 716 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 IZUMO2Q6UXV1 221 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 HIST2H3AQ71DI3 136 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 BCDIN3DQ7Z5W3 292 aaKnown RBP9.22□□□□□ -0.93
TPM1-229ENST00000561242 DTX2Q86UW9 622 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 SPERTQ8NA61 448 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 CSNK2A3Q8NEV1 391 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 OR2Z1Q8NG97 314 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 LILRB1Q8NHL6 650 aaPredicted RBP9.22□□□□□ -0.93
TPM1-229ENST00000561242 RHOXF1Q8NHV9 184 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 ITFG2Q969R8 447 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 HAVCR1Q96D42 359 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 MAP6Q96JE9 813 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 C1QTNF5Q9BXJ0 243 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 MRPL37Q9BZE1 423 aaKnown RBP9.22□□□□□ -0.93
TPM1-229ENST00000561242 GSX2Q9BZM3 304 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 COMMD4Q9H0A8 199 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 LIME1Q9H400 295 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 ABCB9Q9NP78 766 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 DDX28Q9NUL7 540 aaKnown RBP9.22□□□□□ -0.93
TPM1-229ENST00000561242 SNX5Q9Y5X3 404 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 A0A1B0GVI7 797 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 H7C417 338 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 J3QLW9 94 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 PSMD9O00233 223 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 SULT1C4O75897 302 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 NGFP01138 241 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 IGHV3-13P01766 116 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 HTR1AP08908 422 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 DANCRP0C864 163 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 ZNF19P17023 458 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 SLC2A5P22732 501 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 LOXP28300 417 aaPredicted RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 DCTDP32321 178 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 MAP2K3P46734 347 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 HCCSP53701 268 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 ZNF121P58317 390 aaPredicted RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 TNFAIP6P98066 277 aaPredicted RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 TSTQ16762 297 aaKnown RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 PCK2Q16822 640 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 CLEC12BQ2HXU8 276 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 Q5PR19 223 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 LYPD4Q6UWN0 246 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 KCTD8Q6ZWB6 473 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 ENTHD1Q8IYW4 607 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 OR5AS1Q8N127 324 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 PAQR4Q8N4S7 273 aaPredicted RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 BPIFB6Q8NFQ5 453 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 OR11L1Q8NGX0 322 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 UBASH3BQ8TF42 649 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 FAM168AQ92567 244 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 ELMOD3Q96FG2 381 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 TMEM80Q96HE8 168 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 REEP6Q96HR9 211 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 ZNF75AQ96N20 296 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 OR8B4Q96RC9 309 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 PIMREGQ9BSJ6 248 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 TTTY10Q9BZA0 68 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 TPK1Q9H3S4 243 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 SAP30LQ9HAJ7 183 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 DLL4Q9NR61 685 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 C14orf119Q9NWQ9 140 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 NKX1-2Q9UD57 310 aaPredicted RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 PURGQ9UJV8 347 aaKnown RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 ERGIC3Q9Y282 383 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 EXOSC1Q9Y3B2 195 aaKnown RBP9.21□□□□□ -0.94
TPM1-229ENST00000561242 HIVEP3Q5T1R4 2406 aa9.21□□□□□ -0.94
TPM1-229ENST00000561242 FASNP49327 2511 aaKnown RBP9.2□□□□□ -0.94
TPM1-229ENST00000561242 A0A1W2PQL4 384 aaPredicted RBP9.2□□□□□ -0.94
TPM1-229ENST00000561242 CCDC182A6NF36 153 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 C17orf100A8MU93 164 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 MYL12BO14950 172 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 APOL3O95236 402 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 CLPTM1O96005 669 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 SLC2A1P11166 492 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 DBTP11182 482 aaKnown RBP9.2□□□□□ -0.94
TPM1-229ENST00000561242 NAT2P11245 290 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 DAOP14920 347 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 ATP6V1B1P15313 513 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 OPRL1P41146 370 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 WNT5AP41221 380 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 MAD2L1BPQ15013 274 aaPredicted RBP9.2□□□□□ -0.94
TPM1-229ENST00000561242 C6orf52Q5T4I8 152 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 OR2T2Q6IF00 324 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 PRSS57Q6UWY2 283 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 RFPL4BQ6ZWI9 263 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 MYPOPQ86VE0 399 aaPredicted RBP9.2□□□□□ -0.94
TPM1-229ENST00000561242 KLBQ86Z14 1044 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 EGFL6Q8IUX8 553 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 ZNF101Q8IZC7 436 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 KLHL36Q8N4N3 616 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 BHLHE23Q8NDY6 225 aa9.2□□□□□ -0.94
TPM1-229ENST00000561242 CCDC54Q8NEL0 328 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms