RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PRSS12P56730 875 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 TRAP1Q12931 704 aaKnown RBP13.58□□□□□ -0.24
SNX1-213ENST00000561026 AWAT1Q58HT5 328 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 PGBD2Q6P3X8 592 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 CPLX4Q7Z7G2 160 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 KLBQ86Z14 1044 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 C1orf87Q8N0U7 546 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 BCL6BQ8N143 479 aaPredicted RBP13.58□□□□□ -0.24
SNX1-213ENST00000561026 CELF2-AS1Q8N7Q2 184 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 TMEM246Q9BRR3 403 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 NSRP1Q9H0G5 558 aaKnown RBP13.58□□□□□ -0.24
SNX1-213ENST00000561026 MRPL22Q9NWU5 206 aaKnown RBP13.58□□□□□ -0.24
SNX1-213ENST00000561026 ATP8B1O43520 1251 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 KRT36O76013 467 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 PPIAL4GP0DN37 164 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 EGR1P18146 543 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 PRTN3P24158 256 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 HMGA2P52926 109 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 GNB2P62879 340 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX1-213ENST00000561026 MALLQ13021 153 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 MAB21L1Q13394 359 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 ZNF404Q494X3 552 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 CLEC12AQ5QGZ9 265 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 FAM201AQ5SY85 155 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 BTNL3Q6UXE8 466 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 LRRN1Q6UXK5 716 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 ZDHHC21Q8IVQ6 265 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 SGMS2Q8NHU3 365 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 RAB40AQ8WXH6 277 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 SLCO4A1Q96BD0 722 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 PLEKHA8Q96JA3 519 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 MAP6Q96JE9 813 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 DDOQ99489 341 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 EGLN3Q9H6Z9 239 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 TAGLN3Q9UI15 199 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 KCNG2Q9UJ96 466 aa13.57□□□□□ -0.24
SNX1-213ENST00000561026 MGAM2Q2M2H8 2515 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 ZNF823P16415 610 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 TPTEP56180 551 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 SPATS1Q496A3 300 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 PGAP1Q75T13 922 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 Q8TCH9 128 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 SPRYD4Q8WW59 207 aaPredicted RBP13.56□□□□□ -0.24
SNX1-213ENST00000561026 ERGIC1Q969X5 290 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 DACT3Q96B18 629 aaPredicted RBP13.56□□□□□ -0.24
SNX1-213ENST00000561026 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
SNX1-213ENST00000561026 C1orf147Q96MC9 270 aaPredicted RBP13.56□□□□□ -0.24
SNX1-213ENST00000561026 ZNF48Q96MX3 618 aaPredicted RBP13.56□□□□□ -0.24
SNX1-213ENST00000561026 DUX5Q96PT3 197 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 ARL8BQ9NVJ2 186 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 CDH10Q9Y6N8 788 aa13.56□□□□□ -0.24
SNX1-213ENST00000561026 IGHV2-70DA0A0C4DH43 119 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 DNAJC9-AS1A6NH13 148 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 M0R135 149 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 BHLHE40O14503 412 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 SPRY1O43609 319 aaPredicted RBP13.55□□□□□ -0.24
SNX1-213ENST00000561026 HKR1P10072 659 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 IRF2P14316 349 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 PYCR1P32322 319 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 CD200P41217 278 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 FOXL1Q12952 345 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 ZNF362Q5T0B9 420 aaPredicted RBP13.55□□□□□ -0.24
SNX1-213ENST00000561026 RPL13AP3Q6NVV1 102 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 C16orf89Q6UX73 402 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 NLRC3Q7RTR2 1065 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 CYB561A3Q8NBI2 242 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 OR8B3Q8NGG8 313 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 OR52L1Q8NGH7 329 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 OR10S1Q8NGN2 331 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 SPTSSAQ969W0 71 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 UPRTQ96BW1 309 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 ZNF799Q96GE5 643 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 OR8B2Q96RD0 313 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 MS4A7Q9GZW8 240 aaPredicted RBP13.55□□□□□ -0.24
SNX1-213ENST00000561026 ZMAT3Q9HA38 289 aaKnown RBP13.55□□□□□ -0.24
SNX1-213ENST00000561026 IL20Q9NYY1 176 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 LYVE1Q9Y5Y7 322 aa13.55□□□□□ -0.24
SNX1-213ENST00000561026 KIR2DS1A0A191URI9 304 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 IGHV4-38-2P0DP08 117 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 RPS27P42677 84 aaKnown RBP13.54□□□□□ -0.24
SNX1-213ENST00000561026 PITPNBP48739 271 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 RAD23AP54725 363 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 BAMBIQ13145 260 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 ZNF770Q6IQ21 691 aaPredicted RBP13.54□□□□□ -0.24
SNX1-213ENST00000561026 DCDC5Q6ZRR9 648 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 C9orf139Q6ZV77 190 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 MRPL21Q7Z2W9 205 aaKnown RBP13.54□□□□□ -0.24
SNX1-213ENST00000561026 DEFB107AQ8IZN7 70 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 PARP8Q8N3A8 854 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 LINC00471Q8N535 108 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 OR9Q2Q8NGE9 314 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 OR11L1Q8NGX0 322 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 OR2T4Q8NH00 348 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 BTBD10Q9BSF8 475 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 TRIM15Q9C019 465 aa13.54□□□□□ -0.24
SNX1-213ENST00000561026 SLC22A4Q9H015 551 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms