RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 DCTN6O00399 190 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TOR1AO14656 332 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ABCD4O14678 606 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MAGEB4O15481 346 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 SPRY2O43597 315 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SRPX2O60687 465 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 PRAMEF2O60811 474 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SDC3O75056 442 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DNAJB6O75190 326 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RDH16O75452 317 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SRSF10O75494 262 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 CTAG2O75638 210 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SERPINI2O75830 405 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TOXO94900 526 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 KDM4BO94953 1096 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 AKR7A3O95154 331 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NSA2O95478 260 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 APBB3O95704 486 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PAK4O96013 591 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 HPP00738 406 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CSTAP01040 98 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 BGLAPP02818 100 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CLPSP04118 112 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 APODP05090 189 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ANXA2P07355 339 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 DUX4L2P0CJ85 424 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DUX4L3P0CJ86 424 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DUX4L4P0CJ87 422 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DUX4L5P0CJ88 424 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DUX4L6P0CJ89 424 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DUX4L7P0CJ90 424 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 AKAIN1P0CW23 69 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TMIGD3P0DMS9 266 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 OR8G3PP0DMU2 310 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CT45A8P0DMV1 189 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CT45A9P0DMV2 189 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PNMTP11086 282 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RNH1P13489 461 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 ICAM2P13598 275 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF35P13682 527 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MGMTP16455 207 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 HLA-GP17693 338 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 IGFBP3P17936 291 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 ANXA7P20073 488 aaKnown RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 TBPP20226 339 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ALOX5APP20292 161 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NFYAP23511 347 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 IL32P24001 234 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MST1P26927 711 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 GRPRP30550 384 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 AGTR1P30556 359 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 GABRA3P34903 492 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ACTR1BP42025 376 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TNFRSF4P43489 277 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 GABRA4P48169 554 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 POU3F4P49335 361 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CENPAP49450 140 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TPMTP51580 245 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CAPZA1P52907 286 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 HCCSP53701 268 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CLDN12P56749 244 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 SOX8P57073 446 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TAS2R19P59542 299 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ACTR1AP61163 376 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ARF3P61204 181 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 RASGEF1BQ0VAM2 473 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 FUT7Q11130 342 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PLA2G7Q13093 441 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 GPR18Q14330 331 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF267Q14586 743 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 KIR2DS5Q14953 304 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNHIT3Q15649 155 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 C2orf68Q2NKX9 166 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DEFB115Q30KQ5 88 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PCGF3Q3KNV8 242 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ITPRIPL2Q3MIP1 535 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 GXYLT1Q4G148 440 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 KLHL26Q53HC5 615 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 CT45A2Q5DJT8 189 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MESTQ5EB52 335 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TMEM196Q5HYL7 178 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 WDR38Q5JTN6 314 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TMEM240Q5SV17 173 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 EEF1A1P5Q5VTE0 462 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DCAF12L2Q5VW00 463 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 LIPNQ5VXI9 398 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ZNF660Q6AZW8 331 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 WBP2NLQ6ICG8 309 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 FAAP20Q6NZ36 180 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MTFR2Q6P444 385 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 LEG1Q6P5S2 330 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 PSRC1Q6PGN9 363 aaPredicted RBP2.18□□□□□ -2.06
SPG11-223ENST00000560858 TSSK4Q6SA08 328 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ARSKQ6UWY0 536 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ALKAL2Q6UX46 152 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NHLRC1Q6VVB1 395 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 DGAT2L6Q6ZPD8 337 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 TMUB2Q71RG4 321 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 BIVMQ86UB2 503 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 JAZF1Q86VZ6 243 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms