RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ANOS1P23352 680 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 ART1P52961 327 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 TAB1Q15750 504 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 RAB11BQ15907 218 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 C1orf100Q5SVJ3 147 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 DRAM2Q6UX65 266 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 CCBE1Q6UXH8 406 aaPredicted RBP11.31□□□□□ -0.6
SNX1-211ENST00000560829 ZNF813Q6ZN06 617 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 FAM57BQ71RH2 274 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 SLC16A14Q7RTX9 510 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.31□□□□□ -0.6
SNX1-211ENST00000560829 C19orf18Q8NEA5 215 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 CCDC54Q8NEL0 328 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 OR51A2Q8NGJ7 313 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 OR5D14Q8NGL3 314 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 OR6M1Q8NGM8 313 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 SNIP1Q8TAD8 396 aaKnown RBP11.31□□□□□ -0.6
SNX1-211ENST00000560829 SLC25A28Q96A46 364 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 APH1AQ96BI3 265 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 PPP1R14BQ96C90 147 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 ADAT3Q96EY9 351 aaPredicted RBP11.31□□□□□ -0.6
SNX1-211ENST00000560829 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 PGAM5Q96HS1 289 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 SLC22A4Q9H015 551 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 C11orf54Q9H0W9 315 aaPredicted RBP11.31□□□□□ -0.6
SNX1-211ENST00000560829 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 CLEC4AQ9UMR7 237 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 WASF3Q9UPY6 502 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 RHBDD3Q9Y3P4 386 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 SLC22A20A6NK97 555 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 ZNF587BE7ETH6 402 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 F5H5K5 113 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 GSTZ1O43708 216 aaPredicted RBP11.3□□□□□ -0.6
SNX1-211ENST00000560829 TGM6O95932 706 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 MMP7P09237 267 aaPredicted RBP11.3□□□□□ -0.6
SNX1-211ENST00000560829 PSG4Q00888 419 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 FOXC1Q12948 553 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 NRARPQ7Z6K4 114 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 SKA3Q8IX90 412 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 OR1F12Q8NHA8 337 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 SYNPRQ8TBG9 265 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 RFT1Q96AA3 541 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 S100A16Q96FQ6 103 aaKnown RBP11.3□□□□□ -0.6
SNX1-211ENST00000560829 THAP7Q9BT49 309 aaPredicted RBP11.3□□□□□ -0.6
SNX1-211ENST00000560829 OR2H1Q9GZK4 316 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 TMEM138Q9NPI0 162 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 CEP250Q9BV73 2442 aa11.3□□□□□ -0.6
SNX1-211ENST00000560829 LOC100289279A0A1B0GTE1 492 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 E9PLN8 166 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SULT1B1O43704 296 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SSX4O60224 188 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 GFRA3O60609 400 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 IGHV3-9P01782 118 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SDHBP21912 280 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 HTR2CP28335 458 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 BDKRB2P30411 391 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 CAPZA1P52907 286 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 TPTEP56180 551 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 ARF1P84077 181 aaKnown RBP11.29□□□□□ -0.6
SNX1-211ENST00000560829 ZNF169Q14929 603 aaPredicted RBP11.29□□□□□ -0.6
SNX1-211ENST00000560829 Q6ZS92 163 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 PGAP1Q75T13 922 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 NUFIP2Q7Z417 695 aaKnown RBP11.29□□□□□ -0.6
SNX1-211ENST00000560829 NAA40Q86UY6 237 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 DTX3Q8N9I9 347 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 OR52H1Q8NGJ2 320 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 OR14K1Q8NGZ2 314 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 WNT5BQ9H1J7 359 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 GLRX2Q9NS18 164 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 CLCF1Q9UBD9 225 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 FAM186AA6NE01 2351 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SS18L1O75177 396 aaPredicted RBP11.29□□□□□ -0.6
SNX1-211ENST00000560829 DBHP09172 617 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 AGTR1P30556 359 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 POU3F4P49335 361 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SPOCK1Q08629 439 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 ZNF774Q6NX45 483 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 ANKRD16Q6P6B7 361 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 CDH26Q8IXH8 852 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 OR51D1Q8NGF3 324 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 FGFBP3Q8TAT2 258 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 C15orf40Q8WUR7 153 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SMIM4Q8WVI0 70 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SLC7A6Q92536 515 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 YIPF5Q969M3 257 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 C10orf35Q96D05 121 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 ZC3HAV1LQ96H79 300 aaKnown RBP11.29□□□□□ -0.6
SNX1-211ENST00000560829 GMPPAQ96IJ6 420 aaPredicted RBP11.29□□□□□ -0.6
SNX1-211ENST00000560829 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 SOX7Q9BT81 388 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 V9GYS6 101 aa11.29□□□□□ -0.6
SNX1-211ENST00000560829 C5orf63A6NC05 138 aa11.28□□□□□ -0.6
SNX1-211ENST00000560829 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms