RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PSKH1P11801 424 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 FCGR1AP12314 374 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 SELEP16581 610 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 SLC15A1P46059 708 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 CDH15P55291 814 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 PRSS12P56730 875 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 CDK5Q00535 292 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 SLC3A1Q07837 685 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 CDK5R2Q13319 367 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 GK2Q14410 553 aaPredicted RBP11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 SNAPC1Q16533 368 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 DPY19L4Q7Z388 723 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 CPOQ8IVL8 374 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZNF283Q8N7M2 679 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR8G5Q8NG78 346 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR10AD1Q8NGE0 317 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR10S1Q8NGN2 331 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 UTP4Q969X6 686 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZMYND19Q96E35 227 aaPredicted RBP11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 LPAR2Q9HBW0 351 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 PPP1R3CQ9UQK1 317 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 WNT9BO14905 357 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 TBX1O43435 398 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 CD55P08174 381 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 ADH4P08319 380 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 SLC2A1P11166 492 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 HNF1AP20823 631 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 DAPP51397 102 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 CRISP1P54107 249 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 RAD23AP54725 363 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 TEX30Q5JUR7 227 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 DRAM2Q6UX65 266 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 Q6ZR03 302 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 IL17RELQ6ZVW7 336 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 CXXC5Q7LFL8 322 aaKnown RBP11□□□□□ -0.65
CTDSPL2-209ENST00000560620 SHFQ7M4L6 423 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 HIST2H2ABQ8IUE6 130 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR13G1Q8NGZ3 307 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 THEM6Q8WUY1 208 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 SPRYD4Q8WW59 207 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-209ENST00000560620 ITLN1Q8WWA0 313 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 LRTOMTQ8WZ04 291 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR2V2Q96R30 315 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 KCNJ15Q99712 375 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 GAL3ST1Q99999 423 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 PRRG3Q9BZD7 231 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 SEMA6AQ9H2E6 1030 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 DDX28Q9NUL7 540 aaKnown RBP11□□□□□ -0.65
CTDSPL2-209ENST00000560620 TMEM100Q9NV29 134 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 DNAJC27Q9NZQ0 273 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 IL19Q9UHD0 177 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 WIPI2Q9Y4P8 454 aa11□□□□□ -0.65
CTDSPL2-209ENST00000560620 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 IGHV3-64DA0A0J9YX35 117 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 GGT3PA6NGU5 568 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 IQCF6A8MYZ5 107 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 B4DSR2 109 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 EBAG9O00559 213 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 PRODHO43272 600 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 IFNA2P01563 188 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 HLA-DPB1P04440 258 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 ANXA2P07355 339 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 H2BFMP0C1H6 154 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 IGFBP5P24593 272 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 NAA10P41227 235 aaPredicted RBP10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 CX3CR1P49238 355 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 SRP9P49458 86 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 ESRRGP62508 458 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 GRB2P62993 217 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 PTGES3Q15185 160 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 SNAI3Q3KNW1 292 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 KRTAP27-1Q3LI81 207 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 SPRNQ5BIV9 151 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 LINC01590Q5TEZ4 76 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 FAHD1Q6P587 224 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 COLCA1Q6ZS62 124 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 ASRGL1Q7L266 308 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 GLCCI1Q86VQ1 547 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 BBS1Q8NFJ9 593 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR2AE1Q8NHA4 323 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 ST7LQ8TDW4 575 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 RAB39BQ96DA2 213 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 ABHD6Q9BV23 337 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZNF665Q9H7R5 613 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 SLC25A19Q9HC21 320 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 BRD7Q9NPI1 651 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 UBAP1Q9NZ09 502 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 LPAR3Q9UBY5 353 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 PCDHB10Q9UN67 800 aa10.99□□□□□ -0.65
CTDSPL2-209ENST00000560620 NAV3Q8IVL0 2385 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 H0YL77 283 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 SELENOFO60613 162 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 MITFO75030 526 aaPredicted RBP10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 LYNP07948 512 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 SBK2P0C263 348 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 ANPEPP15144 967 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 HNRNPA0Q13151 305 aaKnown RBP10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 APOFQ13790 326 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 PCK2Q16822 640 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 TIGD6Q17RP2 521 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms