RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 POLR2J3Q9H1A7 115 aaKnown RBP13.63□□□□□ -0.23
HERC1-207ENST00000560316 RERGLQ9H628 205 aa13.63□□□□□ -0.23
HERC1-207ENST00000560316 KAT8Q9H7Z6 458 aaKnown RBP13.63□□□□□ -0.23
HERC1-207ENST00000560316 FN3KRPQ9HA64 309 aa13.63□□□□□ -0.23
HERC1-207ENST00000560316 SIRT7Q9NRC8 400 aa13.63□□□□□ -0.23
HERC1-207ENST00000560316 ONECUT1Q9UBC0 465 aa13.63□□□□□ -0.23
HERC1-207ENST00000560316 CAB39Q9Y376 341 aaPredicted RBP13.63□□□□□ -0.23
HERC1-207ENST00000560316 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
HERC1-207ENST00000560316 TEX13CA0A0J9YWL9 993 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 A0A1B0GVI7 797 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 OOEPA6NGQ2 149 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 RNASEK-C17orf49H0YIS7 233 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 MPIG6BO95866 241 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 IDH3AP50213 366 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 NSUN5P1Q3KNT7 163 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 MESTQ5EB52 335 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 OR13C2Q8NGS9 318 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 Q96M85 177 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 GRHPRQ9UBQ7 328 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 ATPIF1Q9UII2 106 aa13.62□□□□□ -0.23
HERC1-207ENST00000560316 RPUSD1Q9UJJ7 312 aaKnown RBP13.62□□□□□ -0.23
HERC1-207ENST00000560316 COA3Q9Y2R0 106 aaPredicted RBP13.62□□□□□ -0.23
HERC1-207ENST00000560316 TRAV38-1A0A0B4J264 116 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 PRSS37A4D1T9 235 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 IMPA2O14732 288 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 XPNPEP2O43895 674 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 SLC16A7O60669 478 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 ECDO95905 644 aaPredicted RBP13.61□□□□□ -0.23
HERC1-207ENST00000560316 LSM6P62312 80 aaKnown RBP13.61□□□□□ -0.23
HERC1-207ENST00000560316 KLRD1Q13241 179 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 GK2Q14410 553 aaPredicted RBP13.61□□□□□ -0.23
HERC1-207ENST00000560316 OR8G1Q15617 311 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 VMACQ2NL98 169 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 CCDC80Q76M96 950 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.61□□□□□ -0.23
HERC1-207ENST00000560316 OAFQ86UD1 273 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 FAM90A1Q86YD7 464 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 PNKDQ8N490 385 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 OR5R1Q8NH85 324 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 NPRL2Q8WTW4 380 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 POLR1DQ9Y2S0 133 aa13.61□□□□□ -0.23
HERC1-207ENST00000560316 IGHV3OR15-7A0A075B7D8 119 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 A0A1B0GW55 424 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 XKRYO14609 159 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 NPFFO15130 113 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 NDUFA2O43678 99 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 PAHP00439 452 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4L2P0CJ85 424 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4L3P0CJ86 424 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4L4P0CJ87 422 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4L5P0CJ88 424 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4L6P0CJ89 424 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4L7P0CJ90 424 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 CA6P23280 308 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 EEF1B2P24534 225 aaKnown RBP13.6□□□□□ -0.23
HERC1-207ENST00000560316 RPL4P36578 427 aaKnown RBP13.6□□□□□ -0.23
HERC1-207ENST00000560316 SLC9A3P48764 834 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 GZMMP51124 257 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 ELF3P78545 371 aaPredicted RBP13.6□□□□□ -0.23
HERC1-207ENST00000560316 RSPO1Q2MKA7 263 aaPredicted RBP13.6□□□□□ -0.23
HERC1-207ENST00000560316 FOXB2Q5VYV0 432 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4L9Q6RFH8 374 aaPredicted RBP13.6□□□□□ -0.23
HERC1-207ENST00000560316 GLB1L2Q8IW92 636 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 NRMQ8IXM6 262 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 SLCO4A1Q96BD0 722 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 ZNF583Q96ND8 569 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 COQ7Q99807 217 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 MMP28Q9H239 520 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 SYT4Q9H2B2 425 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 DUX4Q9UBX2 424 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 BAG5Q9UL15 447 aa13.6□□□□□ -0.23
HERC1-207ENST00000560316 EFCAB9A8MZ26 197 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 KHDRBS3O75525 346 aaKnown RBP13.59□□□□□ -0.23
HERC1-207ENST00000560316 CD14P08571 375 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 VSIG10L2P0DP72 767 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 ZNF26P17031 533 aaPredicted RBP13.59□□□□□ -0.23
HERC1-207ENST00000560316 SLC18A1P54219 525 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 ST3GAL3Q11203 375 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 MEP1BQ16820 701 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 CORO6Q6QEF8 472 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 METAP1DQ6UB28 335 aaPredicted RBP13.59□□□□□ -0.23
HERC1-207ENST00000560316 CCBE1Q6UXH8 406 aaPredicted RBP13.59□□□□□ -0.23
HERC1-207ENST00000560316 COLCA1Q6ZS62 124 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 ZNF826PQ6ZT77 177 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 NAA40Q86UY6 237 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 CALHM3Q86XJ0 350 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 DPP10Q8N608 796 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 SPERTQ8NA61 448 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 OR4S1Q8NGB4 309 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
HERC1-207ENST00000560316 ZNF570Q96NI8 536 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 HDHD2Q9H0R4 259 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 TRIM36Q9NQ86 728 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 C1orf123Q9NWV4 160 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 RPS6KA6Q9UK32 745 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 A4GNTQ9UNA3 340 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 NDUFAF1Q9Y375 327 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 LHFPL6Q9Y693 200 aa13.59□□□□□ -0.23
HERC1-207ENST00000560316 MEIOCA2RUB1 952 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms