RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PTPRJQ12913 1337 aa3.95□□□□□ -1.78
HMGB3P26-201ENST00000560051 DENND4BO75064 1496 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 A0A1W2PP64 1363 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 A0A0G2JNJ9 132 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 TRBV4-1A0A0J9YWV2 114 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 A0A1B0GU03 582 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 A6NNC1 897 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 A8MWP6 167 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PRSS46E5RG02 174 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 F5H5T6 163 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 SYT7O43581 403 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ITM2AO43736 263 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 MPZL2O60487 215 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 STK16O75716 305 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 OR7C1O76099 320 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 VENTXO95231 258 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 GLUD1P00367 558 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 VTNP04004 478 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 GAPDHP04406 335 aaKnown RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 P04436 131 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 TACSTD2P09758 323 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 LIMS3P0CW19 117 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 LIMS4P0CW20 117 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 CD37P11049 281 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF37AP17032 561 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 TBPP20226 339 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 EFNA1P20827 205 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 MPZP25189 248 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 RPS12P25398 132 aaKnown RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 CERS1P27544 350 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 CHRNB4P30926 498 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 P2RY1P47900 373 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 SGSHP51688 502 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 TPI1P60174 286 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 RHOBP62745 196 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PRKCDQ05655 676 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 CD300CQ08708 224 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ST3GAL1Q11201 340 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 KLRB1Q12918 225 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 UBE2V1Q13404 147 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 EIF2B1Q14232 305 aaKnown RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 RHEBQ15382 184 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 OR1Q1Q15612 314 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 IZUMO4Q1ZYL8 232 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 CLEC12BQ2HXU8 276 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ISXQ2M1V0 245 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 SYTL3Q4VX76 610 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 LY6G6FQ5SQ64 297 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 TMEM78Q5T7P6 136 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 METRNLQ641Q3 311 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 SFRP4Q6FHJ7 346 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZFAND6Q6FIF0 208 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 LAMTOR1Q6IAA8 161 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 NANOGP8Q6NSW7 305 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 RGMBQ6NW40 437 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 UQCC3Q6UW78 93 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PAMR1Q6UXH9 720 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF841Q6ZN19 808 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 MEPCEQ7L2J0 689 aaKnown RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 NOXA1Q86UR1 476 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 LDLRAD3Q86YD5 345 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF547Q8IVP9 402 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 C16orf71Q8IYS4 520 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 DND1Q8IYX4 353 aaKnown RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 SLC35F6Q8N357 371 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PGBD5Q8N414 524 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 SMIM20Q8N5G0 67 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF676Q8N7Q3 588 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 POC1AQ8NBT0 407 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 OR6N1Q8NGY5 312 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 C16orf52Q8NHV5 167 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 LYPD6BQ8NI32 183 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 SFXN5Q8TD22 340 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 RNF138Q8WVD3 245 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ASB10Q8WXI3 467 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PYCR2Q96C36 320 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 WDYHV1Q96HA8 205 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF582Q96NG8 517 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 COL21A1Q96P44 957 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 GNRHR2Q96P88 292 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 DEFB118Q96PH6 123 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 UHRF2Q96PU4 802 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 GPR22Q99680 433 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 C20orf144Q9BQM9 153 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 HSPB9Q9BQS6 159 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 GINS3Q9BRX5 216 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 CABLES2Q9BTV7 478 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PRRG4Q9BZD6 226 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 MEGF9Q9H1U4 602 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 MAP1LC3AQ9H492 121 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF385DQ9H6B1 395 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF696Q9H7X3 374 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PTGES2Q9H7Z7 377 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 TBC1D17Q9HA65 648 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 FAM30AQ9NZY2 134 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 Q9UFV3 132 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 ZNF107Q9UII5 783 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P26-201ENST00000560051 CHST2Q9Y4C5 530 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms