RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TMEM9BQ9NQ34 198 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 CGGBP1Q9UFW8 167 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 WASHC3Q9Y3C0 194 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 A0A087X0M5 115 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 A0A1B0GX30 115 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 FZD6O60353 706 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 CTSAP10619 480 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 BPIFA4PQ86YQ2 179 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMEM56Q96MV1 263 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 COL5A2P05997 1499 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 MST1RQ04912 1400 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 OOEPA6NGQ2 149 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 GLTPD2A6NH11 291 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 SYPL1Q16563 259 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 BHLHE23Q8NDY6 225 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 NRG4Q8WWG1 115 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 PRO1933Q9H354 126 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 TRIP11Q15643 1979 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 HTR6P50406 440 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 CBARPQ8N350 705 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 CHST6Q9GZX3 395 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 SIRPB1O00241 398 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMEM241Q24JQ0 296 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 VRK3Q8IV63 474 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR6C1Q96RD1 312 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 CD226Q15762 336 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 EMC4Q5J8M3 183 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 LYG2Q86SG7 212 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 ISG20Q96AZ6 181 aaKnown RBP12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 C3orf30Q96M34 536 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 IL21Q9HBE4 155 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 CD14P08571 375 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 EMP1P54849 157 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 ASAH1Q13510 395 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 NHSL2Q5HYW2 709 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 NUP37Q8NFH4 326 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 MISP3Q96FF7 219 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 CSF2RAP15509 400 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 SDHAP31040 664 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR1D5P58170 312 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 SPNS1Q9H2V7 528 aa12.65□□□□□ -0.38
CSPG4P12-202ENST00000559989 SP1P08047 785 aa12.65□□□□□ -0.39
CSPG4P12-202ENST00000559989 HOXD13P35453 343 aa12.65□□□□□ -0.39
CSPG4P12-202ENST00000559989 H1FNTQ75WM6 255 aaPredicted RBP12.65□□□□□ -0.39
CSPG4P12-202ENST00000559989 IL22RA2Q969J5 263 aa12.65□□□□□ -0.39
CSPG4P12-202ENST00000559989 BCL9LQ86UU0 1499 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 MAML2Q8IZL2 1156 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM40Q8WWA1 233 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 NRASP01111 189 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 IL5P05113 134 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 RSG1Q9BU20 258 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLIT3O75094 1523 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 SIGLEC6O43699 453 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 PMP22Q01453 160 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 SSBP1Q04837 148 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZNF816Q0VGE8 651 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR2A2Q6IF42 318 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 SPRED1Q7Z699 444 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 ARFGAP1Q8N6T3 406 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 DTD2Q96FN9 168 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 ADGRL4Q9HBW9 690 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 FLVCR2Q9UPI3 526 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 DRGXA6NNA5 263 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 ADRA1AP35348 466 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 CAMKMTQ7Z624 323 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 MOB3BQ86TA1 216 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 BAP18Q8IXM2 172 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 LSMEM1Q8N8F7 131 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 WBP2Q969T9 261 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 TXLNGYQ9BZA5 131 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 OPRK1P41145 380 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 KIR2DS2P43631 304 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 NPY5RQ15761 445 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 ACSM6Q6P461 480 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR4D10Q8NGI6 311 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLC38A5Q8WUX1 472 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 OPALINQ96PE5 141 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 NAA60Q9H7X0 242 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 HCRTO43612 131 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 LY86O95711 162 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR4E1P0C645 316 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 HRH1P35367 487 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 FOXA1P55317 472 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 EGR3Q06889 387 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 COL9A2Q14055 689 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 CCL14Q16627 93 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 TBC1D26Q86UD7 250 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 ANXA10Q9UJ72 324 aa12.64□□□□□ -0.39
CSPG4P12-202ENST00000559989 MYADML2A6NDP7 307 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 APOBEC1P41238 236 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM102Q8N9M5 508 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms