RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	FBXW12	Q6X9E4	464 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	NAA40	Q86UY6	237 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF786	Q8N393	782 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF540	Q8NDQ6	660 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TMEM163	Q8TC26	289 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF799	Q96GE5	643 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	COPS4	Q9BT78	406 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	C9orf16	Q9BUW7	83 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ABHD6	Q9BV23	337 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	POFUT1	Q9H488	388 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RIBC2	Q9H4K1	309 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZFHX3	Q15911	3703 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TIMM8A	O60220	97 aa	Predicted RBP	11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	HPX	P02790	462 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	KITLG	P21583	273 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CARTPT	Q16568	116 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZMAT1	Q5H9K5	638 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TMEM255A	Q5JRV8	349 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	NXNL2	Q5VZ03	156 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	DRAM2	Q6UX65	266 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CBR4	Q8N4T8	237 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF454	Q8N9F8	522 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	OTOS	Q8NHW6	89 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RNF133	Q8WVZ7	376 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	KCNJ15	Q99712	375 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PURG	Q9UJV8	347 aa	Known RBP	11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZDHHC8	Q9ULC8	765 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SELENOF	O60613	162 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MAGEB1	P43366	347 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SLC6A9	P48067	706 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	GRB2	P62993	217 aa	Known RBP	11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MALL	Q13021	153 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LCN1P1	Q5VSP4	162 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MEPCE	Q7L2J0	689 aa	Known RBP	11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RDH5	Q92781	318 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	IL4I1	Q96RQ9	567 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	DIRC2	Q96SL1	478 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PIMREG	Q9BSJ6	248 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TOR3A	Q9H497	397 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	DECR2	Q9NUI1	292 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PTTG3P	Q9NZH4	202 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SCOC	Q9UIL1	159 aa		11.66	□□□□□ -0.54
CHRNB4-204	ENST00000559849	APOC1	P02654	83 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LYN	P07948	512 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PRKX	P51817	358 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CCL8	P80075	99 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MRPS11	P82912	194 aa	Known RBP	11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	HLX	Q14774	488 aa	Predicted RBP	11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	FAM209A	Q5JX71	171 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	AADACL4	Q5VUY2	407 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZBTB49	Q6ZSB9	765 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SPATC1	Q76KD6	591 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	OR8J1	Q8NGP2	316 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	THEM6	Q8WUY1	208 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	EME1	Q96AY2	570 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SMR3A	Q99954	134 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CR1	P17927	2039 aa		11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849	NSD1	Q96L73	2696 aa	Predicted RBP	11.65	□□□□□ -0.54
CHRNB4-204	ENST00000559849		A0A1B0GVG6	124 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MAGEA13P	A6NCF6	341 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SLC22A31	A6NKX4	558 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	VWC2L	B2RUY7	222 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849		M0R129	80 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SPRY3	O43610	288 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ADH4	P08319	380 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GIF	P27352	417 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HSD11B1	P28845	292 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	NAA10	P41227	235 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	AQP4	P55087	323 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CDC42	P60953	191 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SLC16A9	Q7RTY1	509 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MAPK1IP1L	Q8NDC0	245 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TRUB1	Q8WWH5	349 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HRASLS5	Q96KN8	279 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	NR1H4	Q96RI1	486 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GSX1	Q9H4S2	264 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MSL2	Q9HCI7	577 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	LAMP5	Q9UJQ1	280 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HIVEP2	P31629	2446 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	YLPM1	P49750	1951 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CCDC182	A6NF36	153 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ZSCAN5B	A6NJL1	495 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	LYNX1	G3V0Z9	82 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TPD52L2	O43399	206 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	NCR1	O76036	304 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	IGHV1-46	P01743	117 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	LYNX1	P0DP58	116 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ALOX5AP	P20292	161 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	COL8A2	P25067	703 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	NR4A2	P43354	598 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	LOXL1	Q08397	574 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GK2	Q14410	553 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TST	Q16762	297 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OR2T2	Q6IF00	324 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GID4	Q8IVV7	300 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ZNF283	Q8N7M2	679 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GTF3A	Q92664	365 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	AMELY	Q99218	206 aa		11.64	□□□□□ -0.55

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