RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 P2RY10O00398 339 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 SMAD9O15198 467 aaKnown RBP15.68■□□□□ 0.1
SNX1-208ENST00000559844 TRAPPC6AO75865 159 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 GLSO94925 669 aaPredicted RBP15.68■□□□□ 0.1
SNX1-208ENST00000559844 ECDO95905 644 aaPredicted RBP15.68■□□□□ 0.1
SNX1-208ENST00000559844 TTRP02766 147 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 CD37P11049 281 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 ZNF24P17028 368 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 MSR1P21757 451 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 CARD18P57730 90 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 BTG1P62324 171 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 PPIAP62937 165 aaKnown RBP15.68■□□□□ 0.1
SNX1-208ENST00000559844 GRB2P62993 217 aaKnown RBP15.68■□□□□ 0.1
SNX1-208ENST00000559844 PLA1AQ53H76 456 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 RNFT1Q5M7Z0 435 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 PRSS45Q7RTY3 260 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 TMEM123Q8N131 208 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 NKAIN3Q8N8D7 197 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 FCAMRQ8WWV6 532 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 UPRTQ96BW1 309 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 COPZ2Q9P299 210 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 ASH2LQ9UBL3 628 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 NUFIP1Q9UHK0 495 aaKnown RBP15.68■□□□□ 0.1
SNX1-208ENST00000559844 IGSF10Q6WRI0 2623 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 LOC100289279A0A1B0GTE1 492 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 H0YC42 278 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 KRT33AO76009 404 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 ACSM4P0C7M7 580 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 DDOSTP39656 456 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 MAGEA5P43359 124 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 SRP9P49458 86 aaKnown RBP15.67■□□□□ 0.1
SNX1-208ENST00000559844 AP3S2P59780 193 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 TATDN3Q17R31 274 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 RNASE12Q5GAN4 147 aaKnown RBP15.67■□□□□ 0.1
SNX1-208ENST00000559844 PDSS1Q5T2R2 415 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 ASPHD2Q6ICH7 369 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 FAM166AQ6J272 317 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 LUZP2Q86TE4 346 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 GGNQ86UU5 652 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 GLCCI1Q86VQ1 547 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 SIAH3Q8IW03 269 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 SERPINA12Q8IW75 414 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 TMEM251Q8N6I4 163 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 FOXRED1Q96CU9 486 aaPredicted RBP15.67■□□□□ 0.1
SNX1-208ENST00000559844 NELFAQ9H3P2 528 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 INMT-MINDY4F8WBC2 141 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 DHHO43323 396 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 SYT7O43581 403 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 POU3F2P20265 443 aaPredicted RBP15.67■□□□□ 0.1
SNX1-208ENST00000559844 CDK2P24941 298 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 GDNFP39905 211 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 PTH2RP49190 550 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 ZNF84P51523 738 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 SGCAQ16586 387 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 HYAL4Q2M3T9 481 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 WIPI1Q5MNZ9 446 aaPredicted RBP15.67■□□□□ 0.1
SNX1-208ENST00000559844 OR51D1Q8NGF3 324 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 OR6M1Q8NGM8 313 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 OR6F1Q8NGZ6 308 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 OR2V1Q8NHB1 315 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 FAM3DQ96BQ1 224 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 ZNF275Q9NSD4 429 aaPredicted RBP15.67■□□□□ 0.1
SNX1-208ENST00000559844 RCE1Q9Y256 329 aa15.67■□□□□ 0.1
SNX1-208ENST00000559844 A0A1B0GVI7 797 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 XRCC3O43542 346 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 ITGA5P08648 1049 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 GSTT2BP0CG30 244 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 CAPZA1P52907 286 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 TAS2R20P59543 309 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 KLF9Q13886 244 aaPredicted RBP15.66■□□□□ 0.1
SNX1-208ENST00000559844 ANKRD16Q6P6B7 361 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 C20orf196Q8IYI0 205 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 FAM109AQ8N4B1 249 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 ZIC4Q8N9L1 334 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 ZBTB8BQ8NAP8 495 aaPredicted RBP15.66■□□□□ 0.1
SNX1-208ENST00000559844 UBASH3BQ8TF42 649 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 ADGRG7Q96K78 797 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 AUNIPQ9H7T9 357 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 PNRC2Q9NPJ4 139 aaKnown RBP15.66■□□□□ 0.1
SNX1-208ENST00000559844 DIABLOQ9NR28 239 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 FOXD3Q9UJU5 478 aaPredicted RBP15.66■□□□□ 0.1
SNX1-208ENST00000559844 NUBP2Q9Y5Y2 271 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 A0A0B4J293 547 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 ATXN7O15265 892 aaPredicted RBP15.66■□□□□ 0.1
SNX1-208ENST00000559844 CELA3AP09093 270 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 HTR2CP28335 458 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 BTCP35070 178 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 POU3F4P49335 361 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 C2orf76Q3KRA6 126 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 FAM180AQ6UWF9 173 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 PLPP7Q8NBV4 271 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 GJC3Q8NFK1 279 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 SLC7A6Q92536 515 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 PHF21AQ96BD5 680 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 ULBP2Q9BZM5 246 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 ALG5Q9Y673 324 aa15.66■□□□□ 0.1
SNX1-208ENST00000559844 KMT2BQ9UMN6 2715 aaPredicted RBP15.65■□□□□ 0.1
SNX1-208ENST00000559844 SPENQ96T58 3664 aaKnown RBP15.65■□□□□ 0.1
SNX1-208ENST00000559844 NAP1L6A6NFF2 107 aa15.65■□□□□ 0.1
SNX1-208ENST00000559844 RER1O15258 196 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms