RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CIARTQ8N365 385 aaPredicted RBP9.75□□□□□ -0.85
SNX1-204ENST00000559061 ZNF454Q8N9F8 522 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 OR2AE1Q8NHA4 323 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 CNIH3Q8TBE1 160 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 APOBEC3DQ96AK3 386 aaPredicted RBP9.75□□□□□ -0.85
SNX1-204ENST00000559061 CMBLQ96DG6 245 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 LYZL4Q96KX0 146 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 OR8B4Q96RC9 309 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 ADI1Q9BV57 179 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 ELOVL3Q9HB03 270 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 TAAR3PQ9P1P4 343 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 EIF3KQ9UBQ5 218 aaKnown RBP9.75□□□□□ -0.85
SNX1-204ENST00000559061 MRM2Q9UI43 246 aaKnown RBP9.75□□□□□ -0.85
SNX1-204ENST00000559061 PURGQ9UJV8 347 aaKnown RBP9.75□□□□□ -0.85
SNX1-204ENST00000559061 CREBBPQ92793 2442 aa9.75□□□□□ -0.85
SNX1-204ENST00000559061 MAP1AP78559 2803 aaPredicted RBP9.74□□□□□ -0.85
SNX1-204ENST00000559061 YLPM1P49750 1951 aaKnown RBP9.74□□□□□ -0.85
SNX1-204ENST00000559061 A0A1B0GWJ7 208 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 A0A1W2PQL4 384 aaPredicted RBP9.74□□□□□ -0.85
SNX1-204ENST00000559061 TRIM64A6NGJ6 449 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 TRIM64BA6NI03 449 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 M0R233 179 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 ATP6V1G2O95670 118 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 HPXP02790 462 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 DBTP11182 482 aaKnown RBP9.74□□□□□ -0.85
SNX1-204ENST00000559061 RGS6P49758 472 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 PSMA6P60900 246 aaKnown RBP9.74□□□□□ -0.85
SNX1-204ENST00000559061 GRB2P62993 217 aaKnown RBP9.74□□□□□ -0.85
SNX1-204ENST00000559061 RIPK1Q13546 671 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 ZNF718Q3SXZ3 478 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 PRSS57Q6UWY2 283 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 PLEKHG7Q6ZR37 379 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 RHOUQ7L0Q8 258 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 ZNF525Q8N782 197 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 THEM6Q8WUY1 208 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 TFAP2CQ92754 450 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 PPP1R14AQ96A00 147 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 SPSB4Q96A44 273 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 HAVCR1Q96D42 359 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 LGALS12Q96DT0 336 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 TBX5Q99593 518 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 APOL4Q9BPW4 351 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 C8orf4Q9NR00 106 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 CLN6Q9NWW5 311 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 FAM206AQ9NX38 181 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 IMPAD1Q9NX62 359 aa9.74□□□□□ -0.85
SNX1-204ENST00000559061 ANK3Q12955 4377 aaKnown RBP9.74□□□□□ -0.85
SNX1-204ENST00000559061 FLNAP21333 2647 aaKnown RBP9.73□□□□□ -0.85
SNX1-204ENST00000559061 ABCA2Q9BZC7 2435 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 IGHV4-30-2A0A087WSY4 118 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 A0A1W2PPW3 197 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 C17orf100A8MU93 164 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 LYNX1G3V0Z9 82 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 MLNRO43193 412 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 F12P00748 615 aaPredicted RBP9.73□□□□□ -0.85
SNX1-204ENST00000559061 IGLV3-1P01715 115 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 IGHV1-46P01743 117 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 LCATP04180 440 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 LYNX1P0DP58 116 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 CAPGP40121 348 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 SLC15A1P46059 708 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 EFNA4P52798 201 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 TPTEP56180 551 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 CXCR4P61073 352 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 TMED1Q13445 227 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 DOC2BQ14184 412 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 OR2T2Q6IF00 324 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 ZNF322Q6U7Q0 402 aaPredicted RBP9.73□□□□□ -0.85
SNX1-204ENST00000559061 ZNF771Q7L3S4 317 aaPredicted RBP9.73□□□□□ -0.85
SNX1-204ENST00000559061 OR8B12Q8NGG6 310 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 CYGBQ8WWM9 190 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 YIPF5Q969M3 257 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 SPTSSAQ969W0 71 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 SGK3Q96BR1 496 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 RNFT2Q96EX2 444 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 Q96MF0 132 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
SNX1-204ENST00000559061 PPP1R3EQ9H7J1 279 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 MSL2Q9HCI7 577 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 AMBNQ9NP70 447 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 LAMP5Q9UJQ1 280 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 EDARQ9UNE0 448 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 EXOGQ9Y2C4 368 aaKnown RBP9.73□□□□□ -0.85
SNX1-204ENST00000559061 MYRFQ9Y2G1 1151 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 F8P00451 2351 aa9.73□□□□□ -0.85
SNX1-204ENST00000559061 hCG_38984A0A1B0GV85 526 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 IQCF6A8MYZ5 107 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 VWC2LB2RUY7 222 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 H0YL77 283 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 SSX4O60224 188 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 RP2O75695 350 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 IGHA1P01876 353 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 ADH4P08319 380 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 H2BFMP0C1H6 154 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 RAC2P15153 192 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 MTNR1AP48039 350 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 SLC6A9P48067 706 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 MVKQ03426 396 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 CDK5R2Q13319 367 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms