RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CCDC59Q9P031 241 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 GCNT4Q9P109 453 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 DHCR7Q9UBM7 475 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 ZNF391Q9UJN7 358 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 CAB39Q9Y376 341 aaPredicted RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 COL22A1Q8NFW1 1626 aaPredicted RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 SDK2Q58EX2 2172 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 IGLV1-36A0A0B4J1U3 117 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 IGHV7-4-1A0A0J9YVY3 117 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 TMEM120BA0PK00 339 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 SCAMP2O15127 329 aaKnown RBP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 EIF3HO15372 352 aaKnown RBP eCLIP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CACNG3O60359 315 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 HUS1O60921 280 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 FKBP6O75344 327 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CLDN11O75508 207 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 SLC22A5O76082 557 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 SERPINE2P07093 398 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 MYL2P10916 166 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 GTF2E2P29084 291 aaKnown RBP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CSNK1EP49674 416 aaKnown RBP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 GDI2P50395 445 aaKnown RBP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 RND2P52198 227 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 SYNJ2BPP57105 145 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 STXBP1P61764 594 aaKnown RBP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CDK5Q00535 292 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 RCAN2Q14206 197 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 ZNF726P1Q15940 193 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 SOHLH1Q5JUK2 328 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 UBE2UQ5VVX9 321 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 TTC23LQ6PF05 361 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 TMEM220Q6QAJ8 160 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CASP12Q6UXS9 341 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CMC1Q7Z7K0 106 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CMTM1Q8IZ96 169 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 GABRG1Q8N1C3 465 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 C1orf64Q8NEQ6 169 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 TTLQ8NG68 377 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 KLF14Q8TD94 323 aaPredicted RBP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 CAPSLQ8WWF8 208 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 NRGNQ92686 78 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 C11orf70Q9BRQ4 267 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 MTG1Q9BT17 334 aaPredicted RBP1.57□□□□□ -2.16
VPS13C-207ENST00000558919 AUNIPQ9H7T9 357 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 SLC17A4Q9Y2C5 497 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 TRIP11Q15643 1979 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 PALLDQ8WX93 1383 aa1.57□□□□□ -2.16
VPS13C-207ENST00000558919 ZSWIM8A7E2V4 1837 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 TRAV19A0A0A6YYK7 116 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 KBTBD11-OT1A0A1B0GTJ5 212 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 H7C0C1 242 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 WRBO00258 174 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 CASQ2O14958 399 aaPredicted RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 POLR1CO15160 346 aaPredicted RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 NUPL2O15504 423 aaKnown RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 CTAG2O75638 210 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 AQP8O94778 261 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 SEMA3DO95025 777 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 FGFR1OPO95684 399 aaKnown RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 IGLV3-25P01717 112 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 ERCC1P07992 297 aaPredicted RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 LGALS3P17931 250 aaKnown RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 BCKDHBP21953 392 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 STOMP27105 288 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 UQCRFS1P47985 274 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 ATP5OP48047 213 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 CDKN2DP55273 166 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 EIF3EP60228 445 aaKnown RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 RPS11P62280 158 aaKnown RBP eCLIP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 SP4Q02446 784 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 GBE1Q04446 702 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 IL18Q14116 193 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 TRAM2Q15035 370 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 H3F3CQ6NXT2 135 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 EIF3MQ7L2H7 374 aaKnown RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 SLC35G3Q8N808 338 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 COX18Q8N8Q8 333 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 BBOF1Q8ND07 529 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 CCDC148Q8NFR7 591 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 OR5K2Q8NHB8 316 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 LYPD6BQ8NI32 183 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 IP6K3Q96PC2 410 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 GSDMAQ96QA5 445 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 XPO6Q96QU8 1125 aaKnown RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 OR5B12Q96R08 314 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 MICU1Q9BPX6 476 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 NCOR1P1Q9H4R4 102 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 C20orf96Q9NUD7 363 aaPredicted RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 CLN8Q9UBY8 286 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 ZNF230Q9UIE0 474 aaPredicted RBP1.56□□□□□ -2.16
VPS13C-207ENST00000558919 INSRP06213 1382 aa1.56□□□□□ -2.16
VPS13C-207ENST00000558919 KCNE1BA0A087WTH5 132 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 SERTM2A0A1B0GWG4 89 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 LRRIQ4A6NIV6 560 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 BTNL10A8MVZ5 291 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 SMKR1H3BMG3 65 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 L7N2F9 121 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 RAD51CO43502 376 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ARG1P05089 322 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 FGF4P08620 206 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms