RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 EGLN1Q9GZT9 426 aa10.19□□□□□ -0.78
TPM1-216ENST00000558910 HDHD2Q9H0R4 259 aa10.19□□□□□ -0.78
TPM1-216ENST00000558910 TBCCD1Q9NVR7 557 aa10.19□□□□□ -0.78
TPM1-216ENST00000558910 DNAJC27Q9NZQ0 273 aa10.19□□□□□ -0.78
TPM1-216ENST00000558910 CHD3Q12873 2000 aaKnown RBP10.19□□□□□ -0.78
TPM1-216ENST00000558910 TCRBV3S1A0A5B6 114 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 C5orf63A6NC05 138 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 M0R129 80 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 TBX1O43435 398 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 RP2O75695 350 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 HLA-DPB1P04440 258 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 TACSTD2P09758 323 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 SBK2P0C263 348 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 ACSM4P0C7M7 580 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 SELEP16581 610 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 ANOS1P23352 680 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 CRYBB2P43320 205 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 TMEM33P57088 247 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 EIF2B1Q14232 305 aaKnown RBP10.18□□□□□ -0.78
TPM1-216ENST00000558910 RSPO1Q2MKA7 263 aaPredicted RBP10.18□□□□□ -0.78
TPM1-216ENST00000558910 CR1LQ2VPA4 569 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 GFOD2Q3B7J2 385 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 PLBD1Q6P4A8 553 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 AMIGO2Q86SJ2 522 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 HIPK1Q86Z02 1210 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 LINC01356Q8N9X3 169 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 OR5L1Q8NGL2 311 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 OR10S1Q8NGN2 331 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 OR2AE1Q8NHA4 323 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 ZNF420Q8TAQ5 688 aaPredicted RBP10.18□□□□□ -0.78
TPM1-216ENST00000558910 DVL3Q92997 716 aaPredicted RBP10.18□□□□□ -0.78
TPM1-216ENST00000558910 APOBEC3DQ96AK3 386 aaPredicted RBP10.18□□□□□ -0.78
TPM1-216ENST00000558910 PLEKHA8Q96JA3 519 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 GAL3ST1Q99999 423 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 WACQ9BTA9 647 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 RBM4Q9BWF3 364 aaKnown RBP10.18□□□□□ -0.78
TPM1-216ENST00000558910 YY1AP1Q9H869 796 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 DNAJB9Q9UBS3 223 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 CYB5R1Q9UHQ9 305 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 WIPI2Q9Y4P8 454 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 COMMD3-BMI1R4GMX3 469 aa10.18□□□□□ -0.78
TPM1-216ENST00000558910 CUBNO60494 3623 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 A6NHS1 94 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 F5H5P2 479 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 M0R135 149 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 MITFO75030 526 aaPredicted RBP10.17□□□□□ -0.78
TPM1-216ENST00000558910 TNFSF4P23510 183 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 SRP14P37108 136 aaKnown RBP10.17□□□□□ -0.78
TPM1-216ENST00000558910 NAA10P41227 235 aaPredicted RBP10.17□□□□□ -0.78
TPM1-216ENST00000558910 RGS6P49758 472 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 ENTPD1P49961 510 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 TPTEP56180 551 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 HIST1H3AP68431 136 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 HIST2H3PS2Q5TEC6 136 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 HIST2H3AQ71DI3 136 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 DPY19L4Q7Z388 723 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 ZNF283Q8N7M2 679 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 BBS1Q8NFJ9 593 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 SPTSSAQ969W0 71 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 HAVCR1Q96D42 359 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 SLAMF6Q96DU3 332 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 ZNF799Q96GE5 643 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 TIMD4Q96H15 378 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 ZNF582Q96NG8 517 aaPredicted RBP10.17□□□□□ -0.78
TPM1-216ENST00000558910 OR2V2Q96R30 315 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 DDOQ99489 341 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 TTTY10Q9BZA0 68 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 SEMA6AQ9H2E6 1030 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 PNRC2Q9NPJ4 139 aaKnown RBP10.17□□□□□ -0.78
TPM1-216ENST00000558910 CYSLTR2Q9NS75 346 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 TVP23BQ9NYZ1 205 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 KCNG2Q9UJ96 466 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 BAIAP2Q9UQB8 552 aa10.17□□□□□ -0.78
TPM1-216ENST00000558910 YLPM1P49750 1951 aaKnown RBP10.17□□□□□ -0.78
TPM1-216ENST00000558910 PRR23D1E9PI22 279 aaPredicted RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 SELENOFO60613 162 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 CIB2O75838 187 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 CYB5R3P00387 301 aaPredicted RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 ANXA2P07355 339 aaKnown RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 MRPL3P09001 348 aaKnown RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 PRR23D2P0DMB1 279 aaPredicted RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 OSMP13725 252 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 RAC2P15153 192 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 SRD5A1P18405 259 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 KITLGP21583 273 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 PAICSP22234 425 aaKnown RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 GSTT1P30711 240 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 GRK5P34947 590 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 RASSF2P50749 326 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 HCCSP53701 268 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 CDH15P55291 814 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 MALLQ13021 153 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 CDK5R2Q13319 367 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 SNAI3Q3KNW1 292 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 ZMAT1Q5H9K5 638 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 FAM209AQ5JX71 171 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 SLC27A4Q6P1M0 643 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 FAHD2BQ6P2I3 314 aaPredicted RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 MRPL21Q7Z2W9 205 aaKnown RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 CPOQ8IVL8 374 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms