RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 RPL27P61353 136 aaKnown RBP8.04□□□□□ -1.12
SPG11-212ENST00000558790 PCBD1P61457 104 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 GNB2P62879 340 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 FBLN7Q53RD9 439 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 ALG10Q5BKT4 473 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 C19orf54Q5BKX5 351 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 LRRN1Q6UXK5 716 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 RHOUQ7L0Q8 258 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 CROCCP2Q86T23 111 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 KLBQ86Z14 1044 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 SLC30A8Q8IWU4 369 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 OR10S1Q8NGN2 331 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 ZNF420Q8TAQ5 688 aaPredicted RBP8.04□□□□□ -1.12
SPG11-212ENST00000558790 SLC26A7Q8TE54 656 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 LIPHQ8WWY8 451 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 TLCD1Q96CP7 247 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 CGREF1Q99674 301 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 CCDC28BQ9BUN5 200 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 MMP27Q9H306 513 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 KAT8Q9H7Z6 458 aaKnown RBP8.04□□□□□ -1.12
SPG11-212ENST00000558790 POLE4Q9NR33 117 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 MAN2C1Q9NTJ4 1040 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 TBCCD1Q9NVR7 557 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 NDRG4Q9ULP0 352 aaKnown RBP8.04□□□□□ -1.12
SPG11-212ENST00000558790 SH3GLB1Q9Y371 365 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 NOTCH3Q9UM47 2321 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 C12orf71A8MTZ7 269 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 H7C1C5 153 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 SURF4O15260 269 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 OR5F1O95221 314 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 CYB5R3P00387 301 aaPredicted RBP8.03□□□□□ -1.12
SPG11-212ENST00000558790 KRTAP10-3P60369 221 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 LCN6P62502 163 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 INTS11Q5TA45 600 aaKnown RBP8.03□□□□□ -1.12
SPG11-212ENST00000558790 RUSC1-AS1Q66K80 236 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 OLFML2AQ68BL7 652 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 ARL9Q6T311 187 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 FIP1L1Q6UN15 594 aaKnown RBP8.03□□□□□ -1.12
SPG11-212ENST00000558790 OR5AS1Q8N127 324 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 DPP10Q8N608 796 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 OR4F5Q8NH21 305 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 OR10A6Q8NH74 314 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 RASSF5Q8WWW0 418 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 SLC7A6Q92536 515 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 CMBLQ96DG6 245 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 CCT8L2Q96SF2 557 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 CHIAQ9BZP6 476 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 BEX1Q9HBH7 125 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 C1RLQ9NZP8 487 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 RIMS3Q9UJD0 308 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 RAB21Q9UL25 225 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 STARD10Q9Y365 291 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 MED31Q9Y3C7 131 aa8.03□□□□□ -1.12
SPG11-212ENST00000558790 TRAV27A0A087WT01 109 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 IGHV3-64DA0A0J9YX35 117 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 LOC100653049A0A140TA62 436 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 A0A1B0GUS0 222 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 M0QZ24 198 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 ANGPT2O15123 496 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 MLNRO43193 412 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 SGCEO43556 437 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 KRT34O76011 436 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 NDUFA7O95182 113 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 COX5BP10606 129 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 SELEP16581 610 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 OR1E2P47887 323 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 PITPNBP48739 271 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 GZMMP51124 257 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 CTXN1P60606 82 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 FGF12P61328 243 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 SCRN3Q0VDG4 424 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 HLXQ14774 488 aaPredicted RBP8.02□□□□□ -1.13
SPG11-212ENST00000558790 ZNF404Q494X3 552 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 FAM201AQ5SY85 155 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 ZNF362Q5T0B9 420 aaPredicted RBP8.02□□□□□ -1.13
SPG11-212ENST00000558790 OTPQ5XKR4 325 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 FAM205BPQ63HN1 556 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 SLC27A4Q6P1M0 643 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 C1orf94Q6P1W5 598 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 CCDC80Q76M96 950 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 MOGAT3Q86VF5 341 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 MICU2Q8IYU8 434 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 FITM2Q8N6M3 262 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 LRRC75AQ8NAA5 344 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 OR8B3Q8NGG8 313 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 FNDC8Q8TC99 324 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 RAB40AQ8WXH6 277 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 HAVCR1Q96D42 359 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 RBP7Q96R05 134 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 OR8B2Q96RD0 313 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 NUDT16L1Q9BRJ7 211 aaKnown RBP8.02□□□□□ -1.13
SPG11-212ENST00000558790 TMEM246Q9BRR3 403 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 POLR2J2Q9GZM3 115 aaKnown RBP8.02□□□□□ -1.13
SPG11-212ENST00000558790 POLR2J3Q9H1A7 115 aaKnown RBP8.02□□□□□ -1.13
SPG11-212ENST00000558790 PRDM13Q9H4Q3 707 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 TMEM165Q9HC07 324 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 MIOXQ9UGB7 285 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 NDUFAF1Q9Y375 327 aa8.02□□□□□ -1.13
SPG11-212ENST00000558790 KIR2DS1A0A191URI9 304 aa8.01□□□□□ -1.13
SPG11-212ENST00000558790 CLPSL1A2RUU4 121 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms