RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RPL14P50914 215 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 XKP51811 444 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 NKX2-5P52952 324 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 UBE2MP61081 183 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 MAGOHP61326 146 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 HERVK_113P61574 105 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 LSM6P62312 80 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 EWSR1Q01844 656 aaKnown RBP eCLIP2.05□□□□□ -2.08
SPG11-206ENST00000558093 OGDHQ02218 1023 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 STX4Q12846 297 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 SELENBP1Q13228 472 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 GANABQ14697 944 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 ATXN7L3Q14CW9 347 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 ARL6IP1Q15041 203 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PON3Q15166 354 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 TAF1AQ15573 450 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 SLC9A3R2Q15599 337 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 GUK1Q16774 197 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 SFT2D3Q587I9 215 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 BRMS1LQ5PSV4 323 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 HES5Q5TA89 166 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 C1orf146Q5VVC0 180 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 HACD4Q5VWC8 232 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 METTL21CQ5VZV1 264 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 ACSM5Q6NUN0 579 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PRMT9Q6P2P2 845 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 ZNF621Q6ZSS3 439 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 ABHD13Q7L211 337 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 NIPA1Q7RTP0 329 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 APTXQ7Z2E3 356 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 ANKRD37Q7Z713 158 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 ZNF429Q86V71 674 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 MFSD6LQ8IWD5 586 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PGAM4Q8N0Y7 254 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 INO80EQ8NBZ0 244 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 ACBD4Q8NC06 268 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 B3GNT7Q8NFL0 401 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 OR5B17Q8NGF7 314 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 OR4A4PQ8NGN8 299 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 FAM172AQ8WUF8 416 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 AP3S1Q92572 193 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 TFGQ92734 400 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 CREB3L1Q96BA8 519 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 S100PBPQ96BU1 408 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 C8orf44Q96CB5 159 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 TIMD4Q96H15 378 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 CELF6Q96J87 481 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 ZNF75AQ96N20 296 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PRRT1Q99946 306 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 P2RY13Q9BPV8 354 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 RSG1Q9BU20 258 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 RNF126Q9BV68 326 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 NAA50Q9GZZ1 169 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 ILKAPQ9H0C8 392 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 ASB7Q9H672 318 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 SLC25A22Q9H936 323 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 BEX1Q9HBH7 125 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 HRASLSQ9HDD0 168 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 THUMPD1Q9NXG2 353 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 CLN8Q9UBY8 286 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 ERVW-1Q9UQF0 538 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 POLDIP2Q9Y2S7 368 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 MMACHCQ9Y4U1 282 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 OARD1Q9Y530 152 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 JCADQ9P266 1359 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 ZFYVE9O95405 1425 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 ADGRL3Q9HAR2 1447 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 SCN2AQ99250 2005 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 A0A1W2PPV9 198 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 LRP5LA4QPB2 252 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ANKRD63C9JTQ0 380 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 LAD1O00515 517 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 NUP155O75694 1391 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 FARS2O95363 451 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 UTS2O95399 124 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 CRYZL1O95825 349 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 LALBAP00709 142 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SERPINA1P01009 418 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 P04436 131 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 MYL2P10916 166 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 RNH1P13489 461 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 BGNP21810 368 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ME2P23368 584 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 CXCR2P25025 360 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 HMGB2P26583 209 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 MPIP34949 423 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SLC1A1P43005 524 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 BDKRB1P46663 353 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 GYG1P46976 350 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 RFX3P48380 749 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 PKNOX1P55347 436 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 CLDN18P56856 261 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 RAB10P61026 200 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 KCNJ2P63252 427 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 MRPS22P82650 360 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 KLRC3Q07444 240 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 AESQ08117 197 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 MED21Q13503 144 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 AQP6Q13520 282 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 C1orf61Q13536 156 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms