RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 CHCHD3Q9NX63 227 aaKnown RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 PTTG3PQ9NZH4 202 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 DUSP13Q9UII6 198 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 EXOSC1Q9Y3B2 195 aaKnown RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 CENPEQ02224 2701 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 TMEM269A0A1B0GVZ9 245 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 J3QLW9 94 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 J3QW42 95 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 ADRA2AP08913 450 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 TACSTD2P09758 323 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 ZNF19P17023 458 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 SERPINF1P36955 418 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 ACTA2P62736 377 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 ACTG2P63267 376 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 MVKQ03426 396 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 MALLQ13021 153 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 MSMPQ1L6U9 139 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 SNAI3Q3KNW1 292 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 ZNF718Q3SXZ3 478 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 CDONQ4KMG0 1287 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 ZNF684Q5T5D7 378 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 MUC15Q8N387 334 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 NRGNQ92686 78 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 MYDGFQ969H8 173 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 SYT3Q9BQG1 590 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 GTF2A1LQ9UNN4 478 aa18.29■□□□□ 0.52
CASC4-204ENST00000557945 CRYBG3Q68DQ2 2970 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 ATE1O95260 518 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 LIMS3P0CW19 117 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 LIMS4P0CW20 117 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 GCH1P30793 250 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 DCTDP32321 178 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 TTKP33981 857 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 ETV1P50549 477 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 OR12D2P58182 307 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 RBM48Q5RL73 367 aaKnown RBP18.28■□□□□ 0.52
CASC4-204ENST00000557945 LIPNQ5VXI9 398 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 C20orf204Q6ZNR8 217 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 KCTD20Q7Z5Y7 419 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 SYNPRQ8TBG9 265 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 MRPL24Q96A35 216 aaKnown RBP18.28■□□□□ 0.52
CASC4-204ENST00000557945 MARS2Q96GW9 593 aaKnown RBP18.28■□□□□ 0.52
CASC4-204ENST00000557945 C4orf36Q96KX1 117 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 JAM3Q9BX67 310 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 PLK3Q9H4B4 646 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 ACOXLQ9NUZ1 547 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 FKBP14Q9NWM8 211 aa18.28■□□□□ 0.52
CASC4-204ENST00000557945 C5orf63A6NC05 138 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 TUBG1P23258 451 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 CRHBPP24387 322 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 MPV17P39210 176 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 SELENOVP59797 346 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 AGAP6Q5VW22 663 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 PRSS45Q7RTY3 260 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 LRP11Q86VZ4 500 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 OR52H1Q8NGJ2 320 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 KLF14Q8TD94 323 aaPredicted RBP18.27■□□□□ 0.51
CASC4-204ENST00000557945 ZNF649Q9BS31 505 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 MRPL37Q9BZE1 423 aaKnown RBP18.27■□□□□ 0.51
CASC4-204ENST00000557945 OR10A2Q9H208 303 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 LIME1Q9H400 295 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 TUBG2Q9NRH3 451 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 PAK1IP1Q9NWT1 392 aaPredicted RBP18.27■□□□□ 0.51
CASC4-204ENST00000557945 FAM206AQ9NX38 181 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 BLOC1S6Q9UL45 172 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 LAMP3Q9UQV4 416 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 LRRC42Q9Y546 428 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 R4GMQ9 66 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 AKAP6Q13023 2319 aa18.27■□□□□ 0.51
CASC4-204ENST00000557945 A0A1W2PPW3 197 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 LOC110117498-PIK3R3F6TDL0 507 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 CLPTM1O96005 669 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 CDK1P06493 297 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 SOD3P08294 240 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 ZNF250P15622 560 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 ANOS1P23352 680 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 C21orf33P30042 268 aaPredicted RBP18.26■□□□□ 0.51
CASC4-204ENST00000557945 PSMB10P40306 273 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 MMP16P51512 607 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 KLF3P57682 345 aaPredicted RBP18.26■□□□□ 0.51
CASC4-204ENST00000557945 MFGE8Q08431 387 aaPredicted RBP18.26■□□□□ 0.51
CASC4-204ENST00000557945 HLXQ14774 488 aaPredicted RBP18.26■□□□□ 0.51
CASC4-204ENST00000557945 TIGD6Q17RP2 521 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 GFOD2Q3B7J2 385 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 GLYATL3Q5SZD4 288 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 TMPRSS11AQ6ZMR5 421 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 KLHL36Q8N4N3 616 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 OR2AE1Q8NHA4 323 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 SGCDQ92629 289 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 CMBLQ96DG6 245 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 ISG20L2Q9H9L3 353 aaKnown RBP18.26■□□□□ 0.51
CASC4-204ENST00000557945 ERVK-18Q9QC07 812 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 CLEC2DQ9UHP7 191 aa18.26■□□□□ 0.51
CASC4-204ENST00000557945 DCHS2Q6V1P9 2916 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 HRNRQ86YZ3 2850 aaPredicted RBP18.25■□□□□ 0.51
CASC4-204ENST00000557945 UNC79Q9P2D8 2635 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 PNPP00491 289 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 DANCRP0C864 163 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 EEF1B2P24534 225 aaKnown RBP18.25■□□□□ 0.51
CASC4-204ENST00000557945 SLC35A2P78381 396 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms