RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ST7LQ8TDW4 575 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 ZMYND19Q96E35 227 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-211ENST00000557623 ZNF799Q96GE5 643 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 CIB1Q99828 191 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 EGLN1Q9GZT9 426 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 TOR3AQ9H497 397 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 SP140LQ9H930 580 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 CENPMQ9NSP4 180 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 PTTG3PQ9NZH4 202 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 H2AFY2Q9P0M6 372 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-211ENST00000557623 TMEFF2Q9UIK5 374 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-211ENST00000557623 ORC6Q9Y5N6 252 aa10.65□□□□□ -0.7
SLIRP-211ENST00000557623 A0A096LNT2 108 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 SPRY3O43610 288 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 IGHV1-46P01743 117 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 APOC1P02654 83 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 PSKH1P11801 424 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 SELEP16581 610 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 SLC2A5P22732 501 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 TNFSF4P23510 183 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 HSD11B1P28845 292 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 OTX1P32242 354 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-211ENST00000557623 CCL8P80075 99 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 RIN1Q13671 783 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 APOFQ13790 326 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 GGTLC2Q14390 218 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 TSTQ16762 297 aaKnown RBP10.64□□□□□ -0.71
SLIRP-211ENST00000557623 TMEM255AQ5JRV8 349 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 C12orf73Q69YU5 71 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 ABHD6Q9BV23 337 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 GABARAPL3Q9BY60 117 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 BPESC1Q9GZL8 116 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 SAP30LQ9HAJ7 183 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 S100A14Q9HCY8 104 aa10.64□□□□□ -0.71
SLIRP-211ENST00000557623 ACANP16112 2415 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 DYSFO75923 2080 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 IGHV1-69-2A0A0G2JMI3 117 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 TLX2O43763 284 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-211ENST00000557623 PRKYO43930 277 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 NCR1O76036 304 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 LYNP07948 512 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 CD55P08174 381 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 COL8A2P25067 703 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 CRYBB2P43320 205 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 GPR6P46095 362 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-211ENST00000557623 CHN2P52757 468 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 RAD23AP54725 363 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 TMEM33P57088 247 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 CDK5R2Q13319 367 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 HLXQ14774 488 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-211ENST00000557623 NXNL2Q5VZ03 156 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 NAA40Q86UY6 237 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 ZNF283Q8N7M2 679 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 TCEANCQ8N8B7 351 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 BBS1Q8NFJ9 593 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 OTOSQ8NHW6 89 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 TMEM163Q8TC26 289 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 RNF133Q8WVZ7 376 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 GTF3AQ92664 365 aaKnown RBP10.63□□□□□ -0.71
SLIRP-211ENST00000557623 STMN2Q93045 179 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 ELMOD3Q96FG2 381 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 ZNF582Q96NG8 517 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-211ENST00000557623 TEAD3Q99594 435 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 RIBC2Q9H4K1 309 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 MSL2Q9HCI7 577 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 USE1Q9NZ43 259 aa10.63□□□□□ -0.71
SLIRP-211ENST00000557623 SLC22A31A6NKX4 558 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 IQCF6A8MYZ5 107 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 LYNX1G3V0Z9 82 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 CD5LO43866 347 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 SELENOFO60613 162 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 ALPLP05186 524 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 TACSTD2P09758 323 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 H2BFMP0C1H6 154 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 LYNX1P0DP58 116 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 TNFRSF1AP19438 455 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 EPHA2P29317 976 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 ALDH3A2P51648 485 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 PRKXP51817 358 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 RIPPLY3P57055 190 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 TNFAIP6P98066 277 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-211ENST00000557623 EFNB1P98172 346 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 TMEM249Q2WGJ8 235 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 HFEQ30201 348 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 OR2T2Q6IF00 324 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 USP51Q70EK9 711 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 PGAP1Q75T13 922 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 SPATC1Q76KD6 591 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 MEPCEQ7L2J0 689 aaKnown RBP10.62□□□□□ -0.71
SLIRP-211ENST00000557623 SLC16A9Q7RTY1 509 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 MRPL21Q7Z2W9 205 aaKnown RBP10.62□□□□□ -0.71
SLIRP-211ENST00000557623 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-211ENST00000557623 GID4Q8IVV7 300 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 OR8G5Q8NG78 346 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 OR2Z1Q8NG97 314 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 THEM6Q8WUY1 208 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 YIPF5Q969M3 257 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 C9orf16Q9BUW7 83 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms