RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 OR8H2Q8N162 312 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 LGALS14Q8TCE9 139 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 CHPT1Q8WUD6 406 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 GPR137Q96N19 417 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 SDHCQ99643 169 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-233ENST00000557529 WNT5BQ9H1J7 359 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 OR10A2Q9H208 303 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 C12orf49Q9H741 205 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 RNF121Q9H920 327 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 EXTL2Q9UBQ6 330 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 STEAP1Q9UHE8 339 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 N6AMT1Q9Y5N5 214 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 TNRC6AQ8NDV7 1962 aaKnown RBP10.92□□□□□ -0.66
SHMT2-233ENST00000557529 AKAP13Q12802 2813 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 MTRF1O75570 445 aaKnown RBP10.91□□□□□ -0.66
SHMT2-233ENST00000557529 CNOT4O95628 575 aaKnown RBP10.91□□□□□ -0.66
SHMT2-233ENST00000557529 IGLV3-1P01715 115 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 EIF4EP06730 217 aaKnown RBP10.91□□□□□ -0.66
SHMT2-233ENST00000557529 COX5BP10606 129 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 CD37P11049 281 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 AZGP1P25311 298 aaKnown RBP10.91□□□□□ -0.66
SHMT2-233ENST00000557529 PTGER4P35408 488 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 ARR3P36575 388 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 DDOSTP39656 456 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 RANBP1P43487 201 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 CAPZA1P52907 286 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 IL18Q14116 193 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 GUSBP1Q15486 140 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 RAB11BQ15907 218 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 NSUN5P2Q63ZY6 315 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 STEAP3Q658P3 488 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 ASPHD2Q6ICH7 369 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 TMEM53Q6P2H8 277 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 ANKRD16Q6P6B7 361 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 PGAP1Q75T13 922 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 FAM214BQ7L5A3 538 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 SNX29P2Q8IUI4 249 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 PLPP7Q8NBV4 271 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 DNAAF1Q8NEP3 725 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 OR4M1Q8NGD0 313 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 OR5D14Q8NGL3 314 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 OR5M9Q8NGP3 310 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 OR5H6Q8NGV6 325 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 AKR7LQ8NHP1 331 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 FGGYQ96C11 551 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 FOXRED1Q96CU9 486 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-233ENST00000557529 PPP1R3EQ9H7J1 279 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 LIN7BQ9HAP6 207 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 PRSS50Q9UI38 385 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF391Q9UJN7 358 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 TP53TG5Q9Y2B4 290 aa10.91□□□□□ -0.66
SHMT2-233ENST00000557529 NCOA6Q14686 2063 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-233ENST00000557529 A0A0B4J203 849 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 SLC17A2O00624 439 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 WISP2O76076 250 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 ERCC1P07992 297 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-233ENST00000557529 DBHP09172 617 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 GABRA1P14867 456 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 RAB3AP20336 220 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 BDKRB2P30411 391 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 GNALP38405 381 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 NR4A2P43354 598 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 PITPNBP48739 271 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 TGFBR3Q03167 851 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 SCN1BQ07699 218 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 TRIM16LQ309B1 348 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 PABPC1L2AQ5JQF8 200 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 C9orf135Q5VTT2 229 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 TFAP2EQ6VUC0 442 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 Q6ZNX1 250 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 DCDC5Q6ZRR9 648 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 CENPSQ8N2Z9 138 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 OR1M1Q8NGA1 313 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 OR6M1Q8NGM8 313 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 OR1K1Q8NGR3 316 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 OR1J2Q8NGS2 313 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 OR6K3Q8NGY3 331 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 FGFBP3Q8TAT2 258 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 SETD6Q8TBK2 473 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 SNRNP27Q8WVK2 155 aaKnown RBP10.9□□□□□ -0.66
SHMT2-233ENST00000557529 RAB40AQ8WXH6 277 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 NANOS1Q8WY41 292 aaKnown RBP10.9□□□□□ -0.66
SHMT2-233ENST00000557529 SLC7A6Q92536 515 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 C10orf35Q96D05 121 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 FAM71F1Q96KD3 344 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-233ENST00000557529 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 PLEKHA1Q9HB21 404 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 TMEM138Q9NPI0 162 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF319Q9P2F9 582 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 OR5V1Q9UGF6 321 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 ACACAQ13085 2346 aa10.9□□□□□ -0.66
SHMT2-233ENST00000557529 FREM2Q5SZK8 3169 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 A0A096LPE4 126 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 A0A1W2PPZ6 126 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 LOC390937A0A1W2PQ73 354 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 DHRS7CA6NNS2 312 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 LMX1BO60663 402 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 WDR1O75083 606 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 DHRS3O75911 302 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 UBL3O95164 117 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms