RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 A0A1B0GUS0 222 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 IQCMA0A1B0GVH7 501 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 A0A1B0GX12 115 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 WDR91A4D1P6 747 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM247A6NEH6 219 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 DBX1A6NMT0 343 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 A8MXK9 166 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 TYROBPO43914 113 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ENTPD5O75356 428 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 FARS2O95363 451 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ADH4P08319 380 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 MMP7P09237 267 aaPredicted RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 SBK2P0C263 348 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ZCCHC18P0CG32 403 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 PGA4P0DJD7 388 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 PGA3P0DJD8 388 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ADORA3P0DMS8 318 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 CCNOP22674 350 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 PRKAR1BP31321 381 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 MC5RP33032 325 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 CD80P33681 288 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 APLNRP35414 380 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 GDNFP39905 211 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 WNT5AP41221 380 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 RPL14P50914 215 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 KRTAP10-3P60369 221 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 PLP2Q04941 152 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 PAX8Q06710 450 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 MELKQ14680 651 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ZMYND11Q15326 602 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF718Q3SXZ3 478 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 SLC36A2Q495M3 483 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 PDCD4Q53EL6 469 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 THEM4Q5T1C6 240 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 FAM91A1Q658Y4 838 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 OLFML2AQ68BL7 652 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ASPHD2Q6ICH7 369 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 SLC25A24Q6NUK1 477 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ULK3Q6PHR2 472 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 RBPMS2Q6ZRY4 209 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 CCDC121Q6ZUS5 278 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 SLC35D2Q76EJ3 337 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 DPPA2Q7Z7J5 298 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 KLHL36Q8N4N3 616 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 SPICQ8N5J4 248 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 EIF1ADQ8N9N8 165 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 RBM15BQ8NDT2 890 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 OR1J2Q8NGS2 313 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 OR5J2Q8NH18 312 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 OR4F5Q8NH21 305 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 BBS10Q8TAM1 723 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 BCAS4Q8TDM0 211 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 SLC47A1Q96FL8 570 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 MARS2Q96GW9 593 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 KIRREL1Q96J84 757 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 DIRC2Q96SL1 478 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 ZBTB18Q99592 522 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 RBM4BQ9BQ04 359 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 WFDC6Q9BQY6 131 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 OR2J1Q9GZK6 312 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 EGLN1Q9GZT9 426 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 LRMDAQ9H2I8 198 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 PATZ1Q9HBE1 687 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 BEX1Q9HBH7 125 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 MSL2Q9HCI7 577 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 BCL2L10Q9HD36 194 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 A4GALTQ9NPC4 353 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 TNFRSF19Q9NS68 423 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM106BQ9NUM4 274 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 THUMPD1Q9NXG2 353 aaKnown RBP4.9□□□□□ -1.63
VPS33B-207ENST00000557470 FBXL17Q9UF56 701 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 OR5V1Q9UGF6 321 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 LGALS13Q9UHV8 139 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 RAP2CQ9Y3L5 183 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 TANC2Q9HCD6 1990 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 C5orf49A4QMS7 147 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SRRM5B3KS81 715 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 C5orf58C9J3I9 102 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SLC33A1O00400 549 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SDHDO14521 159 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TIMM23O14925 209 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 MGRN1O60291 552 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TPST1O60507 370 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TPST2O60704 377 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 NDUFA7O95182 113 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 ANP32DO95626 131 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TSPAN15O95858 294 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 MT-ATP6P00846 226 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 NGFP01138 241 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 PTHP01270 115 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 IL6P05231 212 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 CD55P08174 381 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 PPIAL4GP0DN37 164 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 ETS2P15036 469 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 STOMP27105 288 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 EPHA3P29320 983 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SLC1A6P48664 564 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 BLVRAP53004 296 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 CDH12P55289 794 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 NCALDP61601 193 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms