RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 MAP2K3P46734 347 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 GSK3BP49841 420 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 NAA20P61599 178 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 NFYCQ13952 458 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 ZNF260Q3ZCT1 412 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 C6orf136Q5SQH8 315 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 FAM91A1Q658Y4 838 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 ULK3Q6PHR2 472 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 ZDHHC24Q6UX98 284 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 PIGWQ7Z7B1 504 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 SLC30A8Q8IWU4 369 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 OR8J2Q8NGG1 315 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 OR5D13Q8NGL4 314 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 ASB10Q8WXI3 467 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 RASD2Q96D21 266 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 NMD3Q96D46 503 aaKnown RBP7.44□□□□□ -1.22
NEDD1-211ENST00000557454 DUS3LQ96G46 650 aaKnown RBP7.44□□□□□ -1.22
NEDD1-211ENST00000557454 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 LIN7BQ9HAP6 207 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 CACYBPQ9HB71 228 aaKnown RBP7.44□□□□□ -1.22
NEDD1-211ENST00000557454 SELENONQ9NZV5 590 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.44□□□□□ -1.22
NEDD1-211ENST00000557454 P2RX2Q9UBL9 471 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 EMCNQ9ULC0 261 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 hCG_1807616A0A1W2PRN6 198 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 SH2D7A6NKC9 451 aaPredicted RBP7.43□□□□□ -1.22
NEDD1-211ENST00000557454 TRIM64CA6NLI5 447 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 CENPBD1B2RD01 187 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 DBHP09172 617 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 ACADSP16219 412 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 JUNBP17275 347 aaPredicted RBP7.43□□□□□ -1.22
NEDD1-211ENST00000557454 CRISP3P54108 245 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 LGALS4P56470 323 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 CLDN8P56748 225 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 ERVFRD-1P60508 538 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 CD47Q08722 323 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 PCK2Q16822 640 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 DEFB136Q30KP8 78 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 LRRC10Q5BKY1 277 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 SLC36A1Q7Z2H8 476 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 ZNF329Q86UD4 541 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 MKXQ8IYA7 352 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 OSR2Q8N2R0 312 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 C11orf42Q8N5U0 333 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 PCYOX1LQ8NBM8 494 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 ACOT11Q8WXI4 607 aaPredicted RBP7.43□□□□□ -1.22
NEDD1-211ENST00000557454 SLC35B4Q969S0 331 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 TMEM43Q9BTV4 400 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 NUF2Q9BZD4 464 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 SMURF2Q9HAU4 748 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 NINJ2Q9NZG7 142 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 CALML5Q9NZT1 146 aa7.43□□□□□ -1.22
NEDD1-211ENST00000557454 A0A0B4J2E0 115 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 A0A1B0GX12 115 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 A0A1W2PPL8 197 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 PSMB11A5LHX3 300 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 A6NLC8 198 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 SGCEO43556 437 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 CH25HO95992 272 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 BGNP21810 368 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 CDC25BP30305 580 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 SLC6A1P30531 599 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 DNAJB13P59910 316 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 TXNL4AP83876 142 aaKnown RBP7.42□□□□□ -1.22
NEDD1-211ENST00000557454 CASP8Q14790 479 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 OR8G1Q15617 311 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 ZNF74Q16587 644 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 MICBQ29980 383 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 UGT3A2Q3SY77 523 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 ABCA11PQ4W5N1 156 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 ANXA8L1Q5VT79 327 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 SLC25A47Q6Q0C1 308 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 LCA5Q86VQ0 697 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 CREG2Q8IUH2 290 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 ARMC8Q8IUR7 673 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 SLC26A10Q8NG04 563 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 OR5L1Q8NGL2 311 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 SLC38A5Q8WUX1 472 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 HDAC2Q92769 488 aaKnown RBP7.42□□□□□ -1.22
NEDD1-211ENST00000557454 SEH1LQ96EE3 360 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 RNFT2Q96EX2 444 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 TMEM19Q96HH6 336 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 NAPGQ99747 312 aaPredicted RBP7.42□□□□□ -1.22
NEDD1-211ENST00000557454 ELL3Q9HB65 397 aaPredicted RBP7.42□□□□□ -1.22
NEDD1-211ENST00000557454 EMC7Q9NPA0 242 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 MRPL15Q9P015 296 aaKnown RBP7.42□□□□□ -1.22
NEDD1-211ENST00000557454 ZNF180Q9UJW8 692 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 PPP2R2CQ9Y2T4 447 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 IFT52Q9Y366 437 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 LYVE1Q9Y5Y7 322 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 DNAH6Q9C0G6 4158 aa7.42□□□□□ -1.22
NEDD1-211ENST00000557454 IGLV1-36A0A0B4J1U3 117 aa7.41□□□□□ -1.22
NEDD1-211ENST00000557454 A0A1W2PRG6 482 aa7.41□□□□□ -1.22
NEDD1-211ENST00000557454 CCDC154A6NI56 674 aa7.41□□□□□ -1.22
NEDD1-211ENST00000557454 FAM90A8PA6NJQ4 464 aa7.41□□□□□ -1.22
NEDD1-211ENST00000557454 C12orf71A8MTZ7 269 aa7.41□□□□□ -1.22
NEDD1-211ENST00000557454 GLCEO94923 617 aa7.41□□□□□ -1.22
NEDD1-211ENST00000557454 PTBP3O95758 552 aaKnown RBP7.41□□□□□ -1.22
NEDD1-211ENST00000557454 TFF1P04155 84 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms