RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 MOB1AQ9H8S9 216 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 PDE7BQ9NP56 450 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 CYTL1Q9NRR1 136 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 TMEM184BQ9Y519 407 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-231ENST00000557433 NPIPA5E9PKD4 350 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 P2RY10O00398 339 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 TAAR5O14804 337 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 PRKNO60260 465 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-231ENST00000557433 SFT2D2O95562 160 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 ACTL6AO96019 429 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 IFNA4P05014 189 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 NR0B1P51843 470 aaKnown RBP14.51□□□□□ -0.09
SHMT2-231ENST00000557433 ARHGDIBP52566 201 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 GUCA2BQ16661 112 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 H3F3CQ6NXT2 135 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 ADAD2Q8NCV1 583 aaKnown RBP14.51□□□□□ -0.09
SHMT2-231ENST00000557433 OR4K15Q8NH41 348 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 NUDCD2Q8WVJ2 157 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 FGGYQ96C11 551 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 NKX3-1Q99801 234 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-231ENST00000557433 IFT22Q9H7X7 185 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 FAM206AQ9NX38 181 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 NPIPA1Q9UND3 350 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 WIF1Q9Y5W5 379 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 CPAMD8Q8IZJ3 1885 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 C13orf42A0A1B0GVH6 325 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 B4DGG1 531 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 FTCDNL1E5RQL4 147 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 SMAD9O15198 467 aaKnown RBP14.51□□□□□ -0.09
SHMT2-231ENST00000557433 SIGLEC5O15389 551 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 ABCD3P28288 659 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 ZP2Q05996 745 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 SIGLEC14Q08ET2 396 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 KIAA0895LQ68EN5 471 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 OR52W1Q6IF63 320 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 TMEM71Q6P5X7 295 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 PRR22Q8IZ63 422 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 GVQW1Q8N7I0 195 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 KCNK17Q96T54 332 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 UQCC1Q9NVA1 299 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 LPAR3Q9UBY5 353 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 GPR132Q9UNW8 380 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 POMT1Q9Y6A1 747 aa14.51□□□□□ -0.09
SHMT2-231ENST00000557433 TLCD2A6NGC4 264 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 SOX1O00570 391 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-231ENST00000557433 SYT7O43581 403 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 IGHV4-34P06331 123 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 FAM157CP0CG43 387 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 THEGLP0DJG4 465 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 ABOP16442 354 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 GNALP38405 381 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 SGCAQ16586 387 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 SLC29A4Q7RTT9 530 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 NAA40Q86UY6 237 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 METTL27Q8N6F8 245 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-231ENST00000557433 DMBX1Q8NFW5 382 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 MFSD8Q8NHS3 518 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 WWTR1Q9GZV5 400 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 SOHLH2Q9NX45 425 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 MYEF2Q9P2K5 600 aaKnown RBP14.5□□□□□ -0.09
SHMT2-231ENST00000557433 COPS7AQ9UBW8 275 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 FBXO9Q9UK97 447 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-231ENST00000557433 SPTBP11277 2137 aa14.5□□□□□ -0.09
SHMT2-231ENST00000557433 LOC100509620A0A075B734 347 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 SSX5O60225 188 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 TTRP02766 147 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 FPR2P25090 351 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 PAX6P26367 422 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 EIF3IQ13347 325 aaKnown RBP14.49□□□□□ -0.09
SHMT2-231ENST00000557433 TSC22D1Q15714 1073 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 ZNF528Q3MIS6 628 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 OTPQ5XKR4 325 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 KDM8Q8N371 416 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 OR10H5Q8NGA6 315 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 OR52N4Q8NGI2 321 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 KCNG3Q8TAE7 436 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 MARCH1Q8TCQ1 289 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 ST8SIA1Q92185 356 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 SMIM8Q96KF7 97 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 SELENOIQ9C0D9 397 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 TREM1Q9NP99 234 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 CUTCQ9NTM9 273 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 ATG2BQ96BY7 2078 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 COL5A1P20908 1838 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-231ENST00000557433 TCRBV21S2A2A0A5A6 115 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 MPZL1O95297 269 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 GLULP15104 373 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 EMP2P54851 167 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 CLDN6P56747 220 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 C1orf61Q13536 156 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 ZNF542PQ5EBM4 170 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 AVPI1Q5T686 147 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 TMEM92Q6UXU6 159 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 H1FNTQ75WM6 255 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-231ENST00000557433 PEG10Q86TG7 708 aaKnown RBP14.49□□□□□ -0.09
SHMT2-231ENST00000557433 C9orf40Q8IXQ3 194 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 ZSCAN4Q8NAM6 433 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-231ENST00000557433 NUBPLQ8TB37 319 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 ADAMTS17Q8TE56 1095 aa14.49□□□□□ -0.09
SHMT2-231ENST00000557433 GLYATL2Q8WU03 294 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms