RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ANKDD1AQ495B1 522 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 FGD3Q5JSP0 725 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 HIST2H3PS2Q5TEC6 136 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 HIST2H3AQ71DI3 136 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 FKBP9P1Q75LS8 142 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 C1orf87Q8N0U7 546 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 OR5L1Q8NGL2 311 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 SLC7A13Q8TCU3 470 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 LZICQ8WZA0 190 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 LHX4Q969G2 390 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 SLCO4A1Q96BD0 722 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 RSRC1Q96IZ7 334 aaKnown RBP11.68□□□□□ -0.54
SLIRP-210ENST00000557431 COQ7Q99807 217 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 SEMA6AQ9H2E6 1030 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 SRA1Q9HD15 236 aaKnown RBP11.68□□□□□ -0.54
SLIRP-210ENST00000557431 NRIP3Q9NQ35 241 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 MRGBPQ9NV56 204 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 ARMCX1Q9P291 453 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 RNF114Q9Y508 228 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 A0A1B0GW55 424 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 BBIP1A8MTZ0 92 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 PHYHO14832 338 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 ADAM20O43506 726 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 ENSAO43768 121 aaKnown RBP11.67□□□□□ -0.54
SLIRP-210ENST00000557431 TOX4O94842 621 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 SERPINA1P01009 418 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 ACSM4P0C7M7 580 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4L2P0CJ85 424 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4L3P0CJ86 424 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4L4P0CJ87 422 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4L5P0CJ88 424 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4L6P0CJ89 424 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4L7P0CJ90 424 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 CA6P23280 308 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 PSMB10P40306 273 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 RPS27P42677 84 aaKnown RBP11.67□□□□□ -0.54
SLIRP-210ENST00000557431 RAD23AP54725 363 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DLX1P56177 255 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 LIPEQ05469 1076 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 SEC23BQ15437 767 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 COQ5Q5HYK3 327 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4L9Q6RFH8 374 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-210ENST00000557431 ZNF826PQ6ZT77 177 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 CBLL1Q75N03 491 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 RRM2BQ7LG56 351 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 SLC15A3Q8IY34 581 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 RNF113BQ8IZP6 322 aaKnown RBP11.67□□□□□ -0.54
SLIRP-210ENST00000557431 OR2AE1Q8NHA4 323 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 RBM4BQ9BQ04 359 aaKnown RBP11.67□□□□□ -0.54
SLIRP-210ENST00000557431 HDHD2Q9H0R4 259 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 DUX4Q9UBX2 424 aa11.67□□□□□ -0.54
SLIRP-210ENST00000557431 IGHV3OR15-7A0A075B7D8 119 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 IGLV1-36A0A0B4J1U3 117 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 TRBV4-1A0A0J9YWV2 114 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 A0A0U1RQK1 487 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 HTR3EA5X5Y0 456 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 ZNF879B4DU55 563 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 M0QZ24 198 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 NME4O00746 187 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 TNFRSF13BO14836 293 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-210ENST00000557431 GPR137BO60478 399 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 NDUFA7O95182 113 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 GYPAP02724 150 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 LCATP04180 440 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 GATA4P43694 442 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 OMPP47874 163 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 ARF6P62330 175 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 KCNMB1Q16558 191 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 SLC18B1Q6NT16 456 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 OR6V1Q8N148 313 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 LNX2Q8N448 690 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 FAM156AQ8NDB6 213 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 GJC3Q8NFK1 279 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 OR11L1Q8NGX0 322 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 LINC01006Q8NI28 216 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 UBE2FQ969M7 185 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 ERMAPQ96PL5 475 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-210ENST00000557431 NMNAT3Q96T66 252 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 PITX2Q99697 317 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 HCAR1Q9BXC0 346 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 MMP27Q9H306 513 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 GID8Q9NWU2 228 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 ADA2Q9NZK5 511 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 DNAJB11Q9UBS4 358 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 ATPIF1Q9UII2 106 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 B9D1Q9UPM9 204 aa11.66□□□□□ -0.54
SLIRP-210ENST00000557431 A0A1B0GUS0 222 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 UNC119BA6NIH7 251 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 J3QW42 95 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 P2RY10O00398 339 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 GSTA4O15217 222 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 AHCYL1O43865 530 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 NPPAP01160 153 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 PSKH1P11801 424 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 CD200P41217 278 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 SLC7A2P52569 658 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 COX10Q12887 443 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 MAPRE2Q15555 327 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 OR8G1Q15617 311 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 OR8B8Q15620 311 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms