RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 WNT2P09544 360 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 IRF2P14316 349 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 ZNF823P16415 610 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 PRSS12P56730 875 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 GNB2P62879 340 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 UBA52P62987 128 aaKnown RBP11.88□□□□□ -0.51
SNX6-210ENST00000557341 GK2Q14410 553 aaPredicted RBP11.88□□□□□ -0.51
SNX6-210ENST00000557341 RSPO1Q2MKA7 263 aaPredicted RBP11.88□□□□□ -0.51
SNX6-210ENST00000557341 CLEC12AQ5QGZ9 265 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 SLC35F1Q5T1Q4 408 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 MRPL21Q7Z2W9 205 aaKnown RBP11.88□□□□□ -0.51
SNX6-210ENST00000557341 KLBQ86Z14 1044 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 DEFB107AQ8IZN7 70 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 CELF2-AS1Q8N7Q2 184 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 SPTSSAQ969W0 71 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 NEIL1Q96FI4 390 aaPredicted RBP11.88□□□□□ -0.51
SNX6-210ENST00000557341 PLEKHA8Q96JA3 519 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 EGLN3Q9H6Z9 239 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 ARL8BQ9NVJ2 186 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
SNX6-210ENST00000557341 MIOXQ9UGB7 285 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 ARL2BPQ9Y2Y0 163 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 LYVE1Q9Y5Y7 322 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 IGHV3-64DA0A0J9YX35 117 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 M0R135 149 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 BHLHE40O14503 412 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 ZNF205O95201 554 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 FSTL3O95633 263 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 HLA-DPB1P04440 258 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 GATA4P43694 442 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 TPTEP56180 551 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 GNGT1P63211 74 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 ZNF404Q494X3 552 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 KLF17Q5JT82 389 aaPredicted RBP11.87□□□□□ -0.51
SNX6-210ENST00000557341 BTNL3Q6UXE8 466 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 PGAP1Q75T13 922 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 DOK3Q7L591 496 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 LINC00471Q8N535 108 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 SIGLECL1Q8N7X8 197 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 OR9Q2Q8NGE9 314 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 OR8B3Q8NGG8 313 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 OR2T4Q8NH00 348 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 ZNF799Q96GE5 643 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 OR8B2Q96RD0 313 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 TMEM246Q9BRR3 403 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 BTBD10Q9BSF8 475 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 PLA2G12AQ9BZM1 189 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 ZMAT3Q9HA38 289 aaKnown RBP11.87□□□□□ -0.51
SNX6-210ENST00000557341 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 ZNF69Q9UC07 566 aa11.87□□□□□ -0.51
SNX6-210ENST00000557341 NOP16Q9Y3C1 178 aaKnown RBP11.87□□□□□ -0.51
SNX6-210ENST00000557341 PKD1L1Q8TDX9 2849 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 IGHV2-70DA0A0C4DH43 119 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 TNFRSF11BO00300 401 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 PYCR1P32322 319 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 CD200P41217 278 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 RAD23AP54725 363 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 LRRN1Q6UXK5 716 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 CYP2R1Q6VVX0 501 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 NAA40Q86UY6 237 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 PARP8Q8N3A8 854 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 CYB561A3Q8NBI2 242 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 OR4C15Q8NGM1 316 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 OR11L1Q8NGX0 322 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 SPRYD4Q8WW59 207 aaPredicted RBP11.86□□□□□ -0.51
SNX6-210ENST00000557341 ERGIC1Q969X5 290 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 SLCO4A1Q96BD0 722 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 ADAT1Q9BUB4 502 aaKnown RBP11.86□□□□□ -0.51
SNX6-210ENST00000557341 TRIM15Q9C019 465 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 TBC1D23Q9NUY8 699 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 IL20Q9NYY1 176 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 ACTR3BQ9P1U1 418 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 COMMD3-BMI1R4GMX3 469 aa11.86□□□□□ -0.51
SNX6-210ENST00000557341 CCNB2O95067 398 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 PPIAL4GP0DN37 164 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 ATP6V1B2P21281 511 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 OTX1P32242 354 aaPredicted RBP11.85□□□□□ -0.51
SNX6-210ENST00000557341 RPS27P42677 84 aaKnown RBP11.85□□□□□ -0.51
SNX6-210ENST00000557341 MAGEA2P43356 314 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 PITPNBP48739 271 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 MNAT1P51948 309 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 HMGA2P52926 109 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 PAX2Q02962 417 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 PAX8Q06710 450 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 MAB21L1Q13394 359 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 OR8G1Q15617 311 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 AWAT1Q58HT5 328 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 FAM201AQ5SY85 155 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 DRAM2Q6UX65 266 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 DCDC5Q6ZRR9 648 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 RASSF6Q6ZTQ3 369 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 OR8D4Q8NGM9 314 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 OR10S1Q8NGN2 331 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 Q8TCH9 128 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 MS4A7Q9GZW8 240 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms