RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 HIST1H3AP68431 136 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 ZBED5Q49AG3 693 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 MIDNQ504T8 468 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 RABL3Q5HYI8 236 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 HIST2H3PS2Q5TEC6 136 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 CD276Q5ZPR3 534 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 OLFML2AQ68BL7 652 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 GPR139Q6DWJ6 353 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 Q6YL49 198 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 DCDC5Q6ZRR9 648 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 MBOAT2Q6ZWT7 520 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 HIST2H3AQ71DI3 136 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 SPATC1Q76KD6 591 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 FAM122BQ7Z309 247 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 GLB1L2Q8IW92 636 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 NRMQ8IXM6 262 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 ATG16L2Q8NAA4 619 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 OR51A7Q8NH64 312 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 Q8TCH9 128 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 COQ7Q99807 217 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 CITED1Q99966 193 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 NUDT16L1Q9BRJ7 211 aaKnown RBP7.22□□□□□ -1.25
VRK1-206ENST00000557222 TMEM246Q9BRR3 403 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 FNDC11Q9BVV2 318 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 NMNAT1Q9HAN9 279 aaPredicted RBP7.22□□□□□ -1.25
VRK1-206ENST00000557222 EMC7Q9NPA0 242 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 TMEM100Q9NV29 134 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 INTS9Q9NV88 658 aaKnown RBP7.22□□□□□ -1.25
VRK1-206ENST00000557222 GID8Q9NWU2 228 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 VSX1Q9NZR4 365 aaPredicted RBP7.22□□□□□ -1.25
VRK1-206ENST00000557222 KIF17Q9P2E2 1029 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 CLN8Q9UBY8 286 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 TMEM5Q9Y2B1 443 aa7.22□□□□□ -1.25
VRK1-206ENST00000557222 SF3B6Q9Y3B4 125 aaKnown RBP7.22□□□□□ -1.25
VRK1-206ENST00000557222 TRAV27A0A087WT01 109 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 TRAV40A0A0B4J280 105 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 ELOVL7A1L3X0 281 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 CLPSL1A2RUU4 121 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 NUDT19A8MXV4 375 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 M0QZ24 198 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 P2RY10O00398 339 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 TNFRSF13BO14836 293 aaPredicted RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 HOXA3O43365 443 aaPredicted RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 ENSAO43768 121 aaKnown RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 SHOX2O60902 331 aaPredicted RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 GPANK1O95872 356 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 IFNW1P05000 195 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 IRF2P14316 349 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 CTLA4P16410 223 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 SDHAP31040 664 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 RPL4P36578 427 aaKnown RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 PSMB10P40306 273 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 PITPNBP48739 271 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 PDCD1Q15116 288 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 MAPRE2Q15555 327 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 KCNJ8Q15842 424 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 DEFB112Q30KQ8 113 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 CCDC92Q53HC0 331 aaPredicted RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 TTMPQ5BVD1 217 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 GPR157Q5UAW9 335 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 WDR25Q64LD2 544 aaPredicted RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 OR2T2Q6IF00 324 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 C17orf107Q6ZR85 190 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 COLCA1Q6ZS62 124 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 ADCK1Q86TW2 530 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 IGFN1Q86VF2 1251 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 MICU2Q8IYU8 434 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 FITM2Q8N6M3 262 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 GJC3Q8NFK1 279 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 OR2T12Q8NG77 320 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 OR10S1Q8NGN2 331 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 TPD52L3Q96J77 140 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 ZNF570Q96NI8 536 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 GPX7Q96SL4 187 aaPredicted RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 SLC22A4Q9H015 551 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 HDHD2Q9H0R4 259 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 MMP27Q9H306 513 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 NRIP3Q9NQ35 241 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 TRIM36Q9NQ86 728 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 ASH2LQ9UBL3 628 aa7.21□□□□□ -1.26
VRK1-206ENST00000557222 NOP16Q9Y3C1 178 aaKnown RBP7.21□□□□□ -1.26
VRK1-206ENST00000557222 A0A087WUU8 490 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 HMGB1P1B2RPK0 211 aaPredicted RBP7.2□□□□□ -1.26
VRK1-206ENST00000557222 MRASO14807 208 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 FFAR1O14842 300 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 MLNRO43193 412 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 NDUFA2O43678 99 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 EDF1O60869 148 aaKnown RBP7.2□□□□□ -1.26
VRK1-206ENST00000557222 PTP4A3O75365 173 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 NDUFB2O95178 105 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 TXNDC12O95881 172 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 CYB5R3P00387 301 aaPredicted RBP7.2□□□□□ -1.26
VRK1-206ENST00000557222 PI3P19957 117 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 CRABP1P29762 137 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 CD200P41217 278 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 ERFP50548 548 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 RAG2P55895 527 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 FGF12P61328 243 aa7.2□□□□□ -1.26
VRK1-206ENST00000557222 ECH1Q13011 328 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms